Proteomics

Dataset Information

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Cell wall proteome of Tuwongella immobilis


ABSTRACT: Bacteria of the Planctomycetes phylum have many unique cellular features, such as extensive membrane invaginations and the ability to import macromolecules. These features raise intriguing questions about the composition of their cell envelopes. In this study, we have used microscopy, phylogenomics and proteomics to examine the composition and evolution of cell envelope proteins in Tuwongella immobilis and other members of the Planctomycetes. Cryo electron tomography data indicated a distance between the inner and outer membranes of 45 nm in T. immobilis. Consistent with the wide periplasmic space, our bioinformatics studies showed that the periplasmic segments of outer membrane proteins in type II secretion systems are extended in bacteria of the order Planctomycetales. Homologs of two highly abundant cysteine-rich cell wall proteins in T. immobilis were identified in all members of the Planctomycetales, whereas genes for peptidoglycan biosynthesis and cell elongation have been lost at least twice in this group of bacteria. The cell wall proteins contain multiple copies of the YTV motif, which is the only domain that is conserved and unique to the Planctomycetales. Earlier diverging taxa in the Plantomycetes phylum contain genes for peptidoglycan biosynthesis but no homologs to the YTV cell wall proteins. The major remodelling of the cell envelope in the ancestor of the Planctomycetales coincided with the emergence of budding and other unique cellular phenotypes. These results have implications for hypotheses about the process whereby complex cellular features evolve in bacteria.

INSTRUMENT(S): Q Exactive

ORGANISM(S): Tuwongella Immobilis Bacteria

SUBMITTER: Christian Seeger  

LAB HEAD: Siv Andersson

PROVIDER: PXD019121 | Pride | 2020-08-10

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
FigureS7_SDSPAGE.tiff Other
GMBLW1R.fasta Fasta
MS-19-041-1.msf Msf
MS-19-041-1.raw Raw
MS-19-041-2.msf Msf
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Publications

Evolutionary Remodeling of the Cell Envelope in Bacteria of the Planctomycetes Phylum.

Mahajan Mayank M   Seeger Christian C   Yee Benjamin B   Andersson Siv G E SGE  

Genome biology and evolution 20200901 9


Bacteria of the Planctomycetes phylum have many unique cellular features, such as extensive membrane invaginations and the ability to import macromolecules. These features raise intriguing questions about the composition of their cell envelopes. In this study, we have used microscopy, phylogenomics, and proteomics to examine the composition and evolution of cell envelope proteins in Tuwongella immobilis and other members of the Planctomycetes. Cryo-electron tomography data indicated a distance o  ...[more]

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