Proteomics

Dataset Information

0

Proteomic analysis demonstrated transcription factor gene YRR1 deletion in Saccharomyces cerevisiae enhances its resistance to vanillin through the upregulation of transcriptional activator Haa1, coactivator Mbf1, and proteasome assembly chaperone Tma17 expression


ABSTRACT: Vanillin is one of the major phenolic inhibitors of Saccharomyces cerevisiae in lignocellulosic hydrolysates. Deleting transcription factor gene YRR1 improves vanillin resistance by promoting some translation-related processes that were confirmed at the transcription level in our previous studies. In this work, we investigated the effect of proteomic change on vanillin stress and YRR1 deletion. In wild-type cells, vanillin reduced the number of ribosomal proteins and thereby inhibited cells’ translation. YRR1 deletion increased 112 protein quantities; 48 of 112 up-regulated proteins are involved in the stress response, translational and basal transcriptional regulation. Fermentation data showed that the overexpression of HAA1, MBF1, and TMA17, which encode transcriptional activator, coactivator, and proteasome assembly chaperone, respectively, enhanced resistance to vanillin in S. cerevisiae. These results enriched the perspective of molecular mechanisms for YRR1 deletion to protect yeast from vanillin stress and offered novel targets for designing inhibitor-resistant ethanologenic yeast strains.

INSTRUMENT(S): Q Exactive Plus

ORGANISM(S): Saccharomyces Cf. Cerevisiae

SUBMITTER: Xinning Wang  

LAB HEAD: Xinning Wang

PROVIDER: PXD020951 | Pride | 2021-09-09

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
FA197TQ01.zip Other
FA197TQ01_1.raw Raw
FA197TQ01_2.raw Raw
FA197TQ01_3.raw Raw
FA197TQ01_4.raw Raw
Items per page:
1 - 5 of 21
altmetric image

Publications

Proteomic analysis revealed the roles of YRR1 deletion in enhancing the vanillin resistance of Saccharomyces cerevisiae.

Cao Wenyan W   Zhao Weiquan W   Yang Bolun B   Wang Xinning X   Shen Yu Y   Wei Tiandi T   Qin Wensheng W   Li Zailu Z   Bao Xiaoming X  

Microbial cell factories 20210723 1


<h4>Background</h4>Vanillin is one of the important phenolic inhibitors in Saccharomyces cerevisiae for bioconversion of lignocellulosic materials and has been reported to inhibit the translation process in cells. In our previous studies, it was confirmed that the deletion of the transcription factor gene YRR1 enhanced vanillin resistance by promoting some translation-related processes at the transcription level. In this work, we investigated the effects of proteomic changes upon induction of va  ...[more]

Similar Datasets

2021-09-09 | PXD017738 | Pride
2010-07-01 | E-MEXP-2740 | biostudies-arrayexpress
2014-07-28 | E-GEOD-56622 | biostudies-arrayexpress
2012-05-24 | E-GEOD-31176 | biostudies-arrayexpress
2007-07-07 | E-GEOD-441 | biostudies-arrayexpress
2021-01-19 | E-MTAB-9956 | biostudies-arrayexpress
2013-10-18 | E-GEOD-51353 | biostudies-arrayexpress
2022-02-17 | PXD025587 | Pride
2022-02-17 | PXD025673 | Pride
2022-02-17 | PXD025614 | Pride