Proteomics

Dataset Information

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CD49f defines a subset of dysfunctional regulatory T cells circulating in the human peripheral blood


ABSTRACT: The therapeutic use of regulatory T cells (Tregs) in patients with autoimmune disorders has been hampered by the biological variability of memory Treg populations in the peripheral blood. In this study, we reveal through a combination of quantitative proteomic, multiparametric flow cytometry, RNA-seq data analysis and functional assays, that CD49f is heterogeneously expressed among human Tregs and impacts their immunomodulatory function. High expression of CD49f defines a subset of dysfunctional Tregs in the human blood characterized by a Th17-like phenotype and impaired suppressive capacity. CD49f is similarly distributed between naïve and memory Tregs and impacts the expression of CD39, CTLA-4, FoxP3 and CCR6 specifically in the memory compartment. Accumulation of CD49f high memory Tregs in the blood of ulcerative colitis patients correlates with disease severity. Our results highlight important considerations for Treg immunotherapy design in patients with inflammatory bowel disease which could possibly extend to other autoimmune disorders.

INSTRUMENT(S): Orbitrap Fusion

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Cd4-positive Helper T Cell, Regulatory T Cell

SUBMITTER: Harshi Weerakoon  

LAB HEAD: Michelle M. Hill

PROVIDER: PXD022095 | Pride | 2021-08-06

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
Rep1_Treg.raw Raw
Rep1_nonTreg.raw Raw
Rep2_Treg.raw Raw
Rep2_nonTreg.raw Raw
Rep3_Treg.raw Raw
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Publications

A high-resolution mass spectrometry based proteomic dataset of human regulatory T cells.

Weerakoon Harshi H   Miles John J JJ   Lepletier Ailin A   Hill Michelle M MM  

Data in brief 20211206


Regulatory T cells (Tregs) play a core role in maintaining immune tolerance, homeostasis, and host health. High-resolution analysis of the Treg proteome is required to identify enriched biological processes and pathways distinct to this important immune cell lineage. We present a comprehensive proteomic dataset of Tregs paired with conventional CD4<sup>+</sup> (Conv CD4<sup>+</sup>) T cells in healthy individuals. Tregs and Conv CD4<sup>+</sup> T cells were sorted to high purity using dual magne  ...[more]

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