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Spectral library for SARS-COVID proteome and immunopeptidome

ABSTRACT: This project will provide spectra information for COVID-19 proteome and immunopeptidome

INSTRUMENT(S): TripleTOF 6600, Orbitrap Fusion

ORGANISM(S): Synthetic Construct (code 12)

DISEASE(S): Covid-19

SUBMITTER: Pouya Faridi

LAB HEAD: Anthony Purcell

PROVIDER: PXD022191 | Pride | 2021-04-07

REPOSITORIES: Pride

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Dataset's files

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			Action	DRS
	20200417_PF_6600_COVID-19_Synthetic_Pepset_31751_RackA_Chymotrypsin_Rep1.mgf	Mgf
	20200417_PF_6600_COVID-19_Synthetic_Pepset_31751_RackA_Chymotrypsin_Rep1.wiff	Wiff
	20200417_PF_6600_COVID-19_Synthetic_Pepset_31751_RackA_Chymotrypsin_Rep1.wiff.scan	Wiff
	20200417_PF_6600_COVID-19_Synthetic_Pepset_31751_RackA_Chymotrypsin_Rep2.mgf	Mgf
	20200417_PF_6600_COVID-19_Synthetic_Pepset_31751_RackA_Chymotrypsin_Rep2.wiff	Wiff

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1 - 5 of 736

Publications

Resourcing, annotating, and analysing synthetic peptides of SARS-CoV-2 for immunopeptidomics and other immunological studies.

Li Chen C Revote Jerico J Ramarathinam Sri H SH Chung Shan Zou SZ Croft Nathan P NP Scull Katherine E KE Huang Ziyi Z Ayala Rochelle R Braun Asolina A Mifsud Nicole A NA Illing Patricia T PT Faridi Pouya P Purcell Anthony W AW

Proteomics 20210414 17-18

SARS-CoV-2 has caused a significant ongoing pandemic worldwide. A number of studies have examined the T cell mediated immune responses against SARS-CoV-2, identifying potential T cell epitopes derived from the SARS-CoV-2 proteome. Such studies will aid in identifying targets for vaccination and immune monitoring. In this study, we applied tandem mass spectrometry and proteomic techniques to a library of ∼40,000 synthetic peptides, in order to generate a large dataset of SARS-CoV-2 derived peptid ...[more]

PMID: 33811468

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