Proteomics

Dataset Information

0

Structural and functional analyses identify unique features of the Smc5/6 complex among SMC family of complexes


ABSTRACT: Cross-linking mass spectrometry data for integrative structural analyses of the Smc5/6 holo-complex from budding yeast. Electron microscopy, crosslinking mass spectrometry, and computational modeling reveal that while the complex shares an overall organization with other SMC complexes, it possesses several strikingly different features.

INSTRUMENT(S): Orbitrap Fusion

ORGANISM(S): Saccharomyces Cerevisiae (baker's Yeast)

SUBMITTER: Alex Kentsis  

LAB HEAD: Alex Kentsis

PROVIDER: PXD023164 | Pride | 2021-05-05

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
20180820_SMC56_NSE16_W303strain.fasta Fasta
20200328_SMC56_yATP_CDI_R1.msf Msf
20200328_SMC56_yATP_CDI_R1.msfView Msf
20200328_SMC56_yATP_CDI_R1.pdResult Other
20200328_SMC56_yATP_CDI_R1.pdResultView Other
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Publications

Integrative analysis reveals unique structural and functional features of the Smc5/6 complex.

Yu You Y   Li Shibai S   Ser Zheng Z   Sanyal Tanmoy T   Choi Koyi K   Wan Bingbing B   Kuang Huihui H   Sali Andrej A   Kentsis Alex A   Patel Dinshaw J DJ   Zhao Xiaolan X  

Proceedings of the National Academy of Sciences of the United States of America 20210501 19


Structural maintenance of chromosomes (SMC) complexes are critical chromatin modulators. In eukaryotes, the cohesin and condensin SMC complexes organize chromatin, while the Smc5/6 complex directly regulates DNA replication and repair. The molecular basis for the distinct functions of Smc5/6 is poorly understood. Here, we report an integrative structural study of the budding yeast Smc5/6 holo-complex using electron microscopy, cross-linking mass spectrometry, and computational modeling. We show  ...[more]

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