Proteomics

Dataset Information

0

Shotgun proteomics of Kocuria rhizophila PT10


ABSTRACT: Next-generation proteomics of Kocuria rhizophila PT10 for defining the key proteins involved in the response to irradiation.

INSTRUMENT(S): Q Exactive HF

ORGANISM(S): Kocuria Rhizophila

SUBMITTER: Jean ARMENGAUD  

LAB HEAD: Jean Armengaud

PROVIDER: PXD023262 | Pride | 2024-11-06

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
F210848.dat Other
F210848_p0.05.mzid.gz Mzid
F210850.dat Other
F210850_p0.05.mzid.gz Mzid
F210851.dat Other
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Publications

Effect of gamma irradiation on the proteogenome of cold-acclimated Kocuria rhizophila PT10.

Guesmi Sihem S   Ghedira Kais K   Pujic Petar P   Najjari Afef A   Miotello Guylaine G   Cherif Ameur A   Narumi Issay I   Armengaud Jean J   Normand Philippe P   Sghaier Haïtham H  

Research in microbiology 20240731 8


The effects of ionizing radiation (IR) on the protein dynamics of cold-stressed cells of a radioresistant actinobacterium, Kocuria rhizophila PT10, isolated from the rhizosphere of the desert plant Panicum turgidum were investigated using a shotgun methodology based on nanoflow liquid chromatography coupled to tandem mass spectrometry. Overall, 1487 proteins were certified, and their abundances were compared between the irradiated condition and control. IR of cold-acclimated PT10 triggered the o  ...[more]

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