Proteomics

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Venom proteomic analysis of two medically important Nigerian viperidae (Echis ocellatus and Bitis arietans) snake species


ABSTRACT: Hydrophilic interaction liquid chromatography coupled with LC- MS/MS was used to analyze the crude venom extracts of Echis ocellatus (Carpet viper) and Bitis arietans (Puff adder). The gel-free proteomic analysis of the crude venom extracts from E. ocellatus and B. arietans yielded the identification of 86 and 80 proteins, respectively. Seventy- nine proteins were common between the two snake species with a 90.8% similarity. The identified proteins belong to 12 protein families where serine proteases (22.31%) and metalloproteinases (21.06%) were the dominant proteins in the venom of B. arietans. Metalloproteinases (34.84%), phospholipase A 2 s (25.69%) and serine proteases (17.25%) represents the major toxins in the E. ocellatus venom. This study provides some valuable insights into the toxin families to be neutralized in case of envenomation.

INSTRUMENT(S): Orbitrap Fusion

ORGANISM(S): Bitis Arietans Echis Ocellatus

SUBMITTER: Emeka Dingwoke  

LAB HEAD: Emeka John Dingwoke

PROVIDER: PXD024638 | Pride | 2021-03-11

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
15_ug_protein_sample_5_and_8.jpg Other
201912_GM_Viper5.msf Msf
201912_GM_Viper5.mzid.gz Mzid
201912_GM_Viper5.mzid_201912_GM_Viper5.MGF Mzid
201912_GM_Viper5.raw Raw
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