Proteomics

Dataset Information

0

Quantitative phosphoproteomics reveals SnRK1-dependent phosphosites in rice sheaths during grain filling


ABSTRACT: Insufficient leaf photosynthesis promotes sheath NSC transport to the panicle during grain filling. SnRK1 regulates assimilate distribution between plant tissues and organs. However, the mechanism by which SnRK1 regulates sheath NSC transport to the panicle and its response to limited leaf assimilation remain unclear. Here, we performed leaf cutting (LC) at anthesis to simulate insufficient leaf assimilation and set no treatment as a CK. In response to LC, SnRK1 activity increased rapidly, and NSC transport was advanced. Sheath NSCs were not transported in a snrk1a mutant with deficient SnRK1 activity. These results indicated that SnRK1 activity is important for sheath NSC transport. The high correlation of T6P and sucrose and the inhibition of SnRK1 by T6P in sheaths in vitro implied that T6P slightly inhibits SnRK1 activity in rice sheaths in response to sucrose availability. The increase in SnRK1 activity was accompanied by an increase in OsSnRK1a expression and a low sucrose content. Low sucrose signaling increases SnRK1 transcription. Therefore, we speculated that OsSnRK1a expression positively regulates SnRK1 activity in response to low sucrose availability in rice sheaths. Through phosphoproteomics and further PRM verification, 20 phosphosites that depend on SnRK1 and are correlated with NSC transport were obtained. Based on the function of these sites and proteins, we found that SnRK1 regulates starch degradation, sucrose metabolism, phloem transport, sugar transport across tonoplast, and glycolysis via phosphorylation to promote sheath NSC transport. Overall, our results revealed the importance, function and regulatory mechanism of SnRK1 in sheath NSC transport.

INSTRUMENT(S): timsTOF Pro

ORGANISM(S): Oryza Sativa (rice)

TISSUE(S): Leaf Sheath

SUBMITTER: Hu Yuxiang  

LAB HEAD: Yuxiang Hu

PROVIDER: PXD024675 | Pride | 2022-03-18

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
SA016LPST_C0_1_Slot1-27_1_5221.d.zip Other
SA016LPST_C0_2_Slot1-27_1_5222.d.zip Other
SA016LPST_C0_3_Slot1-27_1_5223.d.zip Other
SA016LPST_C10_1_Slot1-29_1_5229.d.zip Other
SA016LPST_C10_2_Slot1-29_1_5230.d.zip Other
Items per page:
1 - 5 of 26

Similar Datasets

2022-03-18 | PXD024670 | Pride
2021-06-01 | GSE168382 | GEO
2018-07-28 | GSE111490 | GEO
2013-01-30 | E-IPKG-1 | biostudies-arrayexpress
2012-06-04 | GSE34632 | GEO
2019-11-12 | PXD013065 | Pride
2017-10-22 | GSE85463 | GEO
2023-07-31 | GSE233938 | GEO
2023-03-11 | PXD025399 | Pride
2023-03-11 | PXD025559 | Pride