Proteomics

Dataset Information

0

(Phospho)Proteomic Characterization of Ptenm3m4 Cortex


ABSTRACT: PTEN has a strong Mendelian association with autism spectrum disorder (ASD), representing a special case in autism’s complex genetic architecture. Animal modeling for constitutional Pten mutation creates an opportunity to study how disruption of Pten affects neurobiology and glean potential insight into ASD pathogenesis. Subsequently, we comprehensively characterized the neural (phospho)proteome of Ptenm3m4/m3m4 mice, which exhibits cytoplasmic-predominant Pten expression, by applying mass spectrometry technology to their brains at two-weeks- (P14) and six-weeks-of-age (P40). The differentially expressed/phosphorylated proteins were subjected to gene enrichment, pathway, and network analyses to assess the affected biology. We identified numerous differentially expressed/phosphorylated proteins, finding greater dysregulation at P40 consistent with prior transcriptomic data. The affected pathways were largely related to PTEN function or neurological processes, while scant direct overlap was found across datasets. Network analysis pointed to ASD risk genes like Pten and Psd-95 as major regulatory hubs, suggesting they likely contribute to initiation or maintenance of cellular and perhaps organismal phenotypes related to ASD.

INSTRUMENT(S): Orbitrap Fusion Lumos, LTQ Orbitrap Elite

ORGANISM(S): Mus Musculus (mouse)

TISSUE(S): Brain

DISEASE(S): Autistic Disorder

SUBMITTER: Ling Li  

LAB HEAD: Charis Eng

PROVIDER: PXD025351 | Pride | 2022-02-17

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
10_19aug805.raw Raw
10_19aug807.raw Raw
10_19jun1003.raw Raw
10_19jun1403.raw Raw
10_19jun2005.raw Raw
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Publications

Transcriptome-(phospho)proteome characterization of brain of a germline model of cytoplasmic-predominant Pten expression with autism-like phenotypes.

Thacker Stetson S   Eng Charis C  

NPJ genomic medicine 20210602 1


PTEN has a strong Mendelian association with autism spectrum disorder (ASD), representing a special case in autism's complex genetic architecture. Animal modeling for constitutional Pten mutation creates an opportunity to study how disruption of Pten affects neurobiology and glean potential insight into ASD pathogenesis. Subsequently, we comprehensively characterized the neural (phospho)proteome of Pten<sup>m3m4/m3m4</sup> mice, which exhibits cytoplasmic-predominant Pten expression, by applying  ...[more]

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