Proteomics

Dataset Information

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Culture and stimulation conditions influence protein expression of primary fibroblasts


ABSTRACT: Tissue fibrosis is a common pathway to organ injury and failure. It is characterized by an excessive deposition of extracellular matrix (ECM) in organs. Deciphering the fibrogenic processes is of utmost importance, as there are few effective therapies in fibrotic diseases 1. Systemic sclerosis (SSc) is a prototypical disease where fibroblasts (Fb) are key effector cells as they differentiate into myofibroblasts in response to chronic inflammation under the influence of transforming growth factor beta 1 (TGF-β1) pathway 2–4. In this study, we compared the proteome of primary Fb in different culture and stimulation conditions. Primary dermal normal human Fb were cultured at passage P3, P5 and P7 with and without Fetal Bovine Serum (FBS). At fifth passage, Fb were stimulated or not with different concentrations of recombinant human active TGF-β1 (0.04, 1 and 5 ng/mL) during 24, 48 and 72 hours.

INSTRUMENT(S): Q Exactive Plus

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Fibroblast Of Dermis, Cell Culture

DISEASE(S): Systemic Scleroderma

SUBMITTER: BRAY FABRICE  

LAB HEAD: Fabrice Bray

PROVIDER: PXD025374 | Pride | 2021-11-03

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
004-24-1-1.msf Msf
004-24-1-1.raw Raw
004-24-1-2.raw Raw
004-24-1-3.raw Raw
004-48-1-1.msf Msf
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Publications


Fibroblasts (Fb) are key effector cells in systemic sclerosis (SSc). Fb stimulation with transforming growth factor beta 1 (TGF-β1) is considered as a positive control in studies assessing fibrogenesis. The lack of standardization of TGF-β1 stimulation might be responsible for discrepancies in experiments performed in different conditions. Using quantitative proteomics analysis, we evaluated the impact of changes in experimental conditions on proteomic profiles of primary Fb. Principal component  ...[more]

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