Proteomics

Dataset Information

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The Phenyl Indole p97 inhibitor, UPCDC-30245, blocks endo-lysosomal degradation and coronavirus entry to host cells


ABSTRACT: Different modes of action small molecule inhibitors provide versatile tools for investigation of biology and development of therapeutics. However, to evaluate their exact mechanism of actions remains to be a challenging tas. We have identified two classes of p97 inhibitors, ATP competitive and allosteric inhibitors. We initially showed that the allosteric phenyl indole p97 inhibitor, UPCDC-30245, does not affect on two well-known cellular functions of p97, Endoplasmic-reticulum-associated protein degradation (EARD) and unfolded protein response (UPR) pathway dramatically, instead strongly increases the lapidated form of microtubule-associated proteins 1A/1B light chain 3B (LC3-II). To evaluate the molecular mechanism of UPCDC-30245, we performed proteomic analysis of UPCDC-30245 treated cells. Our results revealed UPCDC-30245 blocks endo-lysosomal degradation via inhibiting the formation of early endosome and reducing the acidity of lysosome and this is aa potential off-target effect. More importantly, we demonstrated UPCDC-30245 exhibits promising ntiviral effects via blocking virus entry and this could be due to both on-target and off-target effect.

INSTRUMENT(S): Orbitrap Eclipse

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Permanent Cell Line Cell, Cell Culture

DISEASE(S): Colon Cancer

SUBMITTER: Feng Wang  

LAB HEAD: Tsui-Fen Chou

PROVIDER: PXD025822 | Pride | 2022-04-04

REPOSITORIES: Pride

Dataset's files

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Action DRS
DMSO_1.mzML Mzml
DMSO_1.mzid.gz Mzid
DMSO_1.raw Raw
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DMSO_3.raw Raw
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Publications

The p97 Inhibitor UPCDC-30245 Blocks Endo-Lysosomal Degradation.

Wang Feng F   Li Shan S   Cheng Kai-Wen KW   Rosencrans William M WM   Chou Tsui-Fen TF  

Pharmaceuticals (Basel, Switzerland) 20220207 2


The diverse modes of action of small molecule inhibitors provide versatile tools to investigate basic biology and develop therapeutics. However, it remains a challenging task to evaluate their exact mechanisms of action. We identified two classes of inhibitors for the p97 ATPase: ATP competitive and allosteric. We showed that the allosteric p97 inhibitor, UPCDC-30245, does not affect two well-known cellular functions of p97, endoplasmic-reticulum-associated protein degradation and the unfolded p  ...[more]

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