Organ wise proteomic profiling of Indian major carp, Labeo rohita

ABSTRACT: The aim of this study was to develop an organ wise proteome map for Labeo rohita. Using LC-MS/MS, we have performed in-depth proteomics analysis of 19 different sample types, including 17 tissue samples, plasma from female fish and embryo 4-day post fertilization. Whole analysis resulted in the identification of more than more than 8000 proteins with 1% FDR of which more than 76% were identified with two or more than two unique peptides. The dataset show organ wise pattern of protein expression along with extensive catalogue of orgsn wise Post translational modification. This proteomic information would complement the recently published genome to accelerate further research.

INSTRUMENT(S): Orbitrap Fusion

ORGANISM(S): Labeo Rohita (indian Major Carp)

TISSUE(S): Testis, Heart, Spleen, Brain, Embryo, Gill, Skeletal Muscle, Blood Plasma, Liver, Gall Bladder, Gut, Scale, Fin, Kidney, Eye, Swim Bladder, Ovary, Spinal Cord, Skin

SUBMITTER: Mehar Un Nissa  

LAB HEAD: Sanjeeva Srivastava

PROVIDER: PXD027141 | Pride | 2022-01-17

REPOSITORIES: Pride