Proteomics

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A novel C1q domain-containing protein isolated from the bivalve mollusk Modiolus kurilensis recognizing glycans enriched with acidic galactans


ABSTRACT: C1q domain-containing (C1qDC) proteins are a group of biopolymers involved in immune response as pattern recognition receptors (PRRs) in a lectin manner identifying and binding carbohydrate components of pathogen-associated molecular patterns (PAMPs). In the current study, we present a new protein MkC1qDC-1 purified from the hemolymph plasma of Modiolus kurilensis bivalve mollusk widespread in the Northwest Pacific. The isolation procedure included ammonium sulfate precipitation followed by affinity chromatography on pectin-Sepharose. The full-length MkC1qDC-1 sequence was assembled based on mass-spectrometry data supplemented with N-terminal Edman sequencing, and included 156 amino acid residues displaying high homology to C1qDC proteins of bivalves. 2-D electrophoresis of purified MkC1qDC-1 showed a single polypeptide with 19 kDa mass and pI 5.2 in accordance with predicted values. The protein was functionally active after 1 h incubation in temperatures up to 50°C and stable over a wide pH range. MkC1qDC-1 demonstrated antibacterial properties against gram-negative and gram-positive strains.

INSTRUMENT(S): Orbitrap Fusion Lumos

ORGANISM(S): Modiolus Kurilensis

SUBMITTER: Alex von kriegsheim  

LAB HEAD: Alex von Kriegsheim

PROVIDER: PXD027507 | Pride | 2022-02-17

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
New_Project_2.zip Other
checksum.txt Txt
de_novo_peptides.csv Csv
russ_1.raw Raw
russ_1_20190717220810.raw Raw
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Publications

A Novel C1q Domain-Containing Protein Isolated from the Mollusk <i>Modiolus kurilensis</i> Recognizing Glycans Enriched with Acidic Galactans and Mannans.

Grinchenko Andrei V AV   von Kriegsheim Alex A   Shved Nikita A NA   Egorova Anna E AE   Ilyaskina Diana V DV   Karp Tatiana D TD   Goncharov Nikolay V NV   Petrova Irina Y IY   Kumeiko Vadim V VV  

Marine drugs 20211126 12


C1q domain-containing (C1qDC) proteins are a group of biopolymers involved in immune response as pattern recognition receptors (PRRs) in a lectin-like manner. A new protein MkC1qDC from the hemolymph plasma of <i>Modiolus kurilensis</i> bivalve mollusk widespread in the Northwest Pacific was purified. The isolation procedure included ammonium sulfate precipitation followed by affinity chromatography on pectin-Sepharose. The full-length MkC1qDC sequence was assembled using de novo mass-spectromet  ...[more]

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