Proteomics

Dataset Information

0

2′ ,3′-cAMP treatment mimics abiotic stress response


ABSTRACT: For many years, 2′,3′-cyclic adenosine monophosphate (2′,3′-cAMP), a positional isomer of the second messenger 3′,5′-cAMP, has not received enough attention. Recent studies have reported that 2′,3′-cAMP exists in plants and might be involved in stress signaling because 1) its level increases upon wounding and 2) it was shown to participate in stress granule formation. Although 2′,3′-cAMP is known as RNA-degradation product, the effect of its accumulation in the cell remains unknown. Here, we unprecedentedly evaluate responses at the transcriptome, metabolome, and proteome levels to the accumulation of 2′,3′-cAMP in Arabidopsis plants. Data revealed that 2′,3′-cAMP is metabolized into adenosine, suggesting that a well-known cyclic nucleotide - adenosine pathway from human cells might exist also in plants. However, the control transcriptomic data indicated that, despite fewer overlaps, responses to 2′,3′-cAMP and to adenosine differ. Analysis of the transcriptome and proteome in response to 2′,3′-cAMP showed similar changes, known as signatures for abiotic stress response. This is further supported by the fact that adding to the role in facilitating of stress granules (SGs) formation, 2′,3′-cAMP induces changes at the level of proteins known as key components of SGs and can also induce movement of processing bodies (PBs) in the cell.

INSTRUMENT(S): Q Exactive HF

ORGANISM(S): Arabidopsis Thaliana (mouse-ear Cress)

TISSUE(S): Rosette

SUBMITTER: Michał Górka  

LAB HEAD: Aleksandra Skirycz

PROVIDER: PXD028365 | Pride | 2022-05-19

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
0_uM_15_1.raw Raw
0_uM_15_2.raw Raw
0_uM_15_3.raw Raw
0_uM_15_4.raw Raw
0_uM_1_1.raw Raw
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Publications

2',3'-cAMP treatment mimics the stress molecular response in Arabidopsis thaliana.

Chodasiewicz Monika M   Kerber Olga O   Gorka Michal M   Moreno Juan C JC   Maruri-Lopez Israel I   Minen Romina I RI   Sampathkumar Arun A   Nelson Andrew D L ADL   Skirycz Aleksandra A  

Plant physiology 20220301 4


The role of the RNA degradation product 2',3'-cyclic adenosine monophosphate (2',3'-cAMP) is poorly understood. Recent studies have identified 2',3'-cAMP in plant material and determined its role in stress signaling. The level of 2',3'-cAMP increases upon wounding, in the dark, and under heat, and 2',3'-cAMP binding to an RNA-binding protein, Rbp47b, promotes stress granule (SG) assembly. To gain further mechanistic insights into the function of 2',3'-cAMP, we used a multi-omics approach by comb  ...[more]

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