Proteomics

Dataset Information

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Identification of novel glycan modification on S-layer protein from Methanoculleus Marisnigri


ABSTRACT: Mass spectrometry and NMR were used to characterize the N- and O-glycan modifications expressed by Methanoculleus marisnigri, a mesophilic methanogen from the Order Methanomicrobiales. The S-layer protein was identified as a PGF-CTERM sorting domain-containing protein encoded by MEMAR_RS02690 and is both N- and O-glycosylated. Two N-glycans were identified by NMR and MS analysis: a trisaccharide alpha-GlcNAc-4-beta-GlcNAc3NGaAN-4-beta-Glc-Asn where the 2nd residue is 2-N-acetyl, 3-N-glyceryl-glucosamide and a disaccharide beta-GlcNAc3NAcAN-4-beta-Glc-Asn, where the terminal residue is 2,3 di-N-acetyl-glucosamide. The S-layer protein is also extensively modified in the threonine-rich region near the C-terminus with O-glycans composed exclusively of hexoses. While the S-layer protein has a predicted PGF-CTERM processing site, no evidence of a truncated and lipidated C-terminus, the expected product of processing by an archaeosortase, was found. This is the first report of N- and O-glycosylation in an archaeon from the Order Methanomicrobiales.

INSTRUMENT(S): Orbitrap Eclipse, Synapt MS

ORGANISM(S): Archaea Methanoculleus Marisnigri Jr1

TISSUE(S): Cell Culture

SUBMITTER: John Kelly  

LAB HEAD: John Kelly

PROVIDER: PXD030331 | Pride | 2023-03-23

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
EGEN160421R18138S02.mzid.gz Mzid
EGEN160421R18138S02.raw Raw
F020371.dat Other
F020371.mgf Mgf
F020372.dat Other
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Publications

Characterizing the N- and O-linked glycans of the PGF-CTERM sorting domain-containing S-layer protein of Methanoculleus marisnigri.

Kelly John J   Vinogradov Evgeny E   Robotham Anna A   Tessier Luc L   Logan Susan M SM   Jarrell Ken F KF  

Glycobiology 20220601 7


The glycosylation of structural proteins is a widespread posttranslational modification in Archaea. Although only a handful of archaeal N-glycan structures have been determined to date, it is evident that the diversity of structures expressed is greater than in the other domains of life. Here, we report on our investigation of the N- and O-glycan modifications expressed by Methanoculleus marisnigri, a mesophilic methanogen from the Order Methanomicrobiales. Unusually, mass spectrometry (MS) anal  ...[more]

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