Proteomics

Dataset Information

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Proteome / pYome of LYN deficient HS-5 stroma cells

ABSTRACT: LYN kinase is a tyrosine kinase, that regulates cellular homeostasis in a context specific manner. Our group could show, that its expression in the leukemic microenvironment of chronic lymphocytic leukemia contributes to disease progression (Nguyen PH et al.; Cancer Cell; 2016). To analyze the effect of LYN kinase on the leukemia supportive phenotype of the bone marrow stromal cell line HS-5, we generated single cell clones of LYN deficient cells. These cells were analyzed in a Multi-Omic approach, including quantitative, label-free proteomic analysis of the Proteome / SILAC labelled analysis of the tyrosine phosphoproteome.

INSTRUMENT(S): Q Exactive Plus, Q Exactive HF

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Stromal Cell Of Bone Marrow, Cell Culture

SUBMITTER: Alexander F. vom Stein  

LAB HEAD: Prof. Michael Hallek

PROVIDER: PXD030582 | Pride | 2023-05-10

REPOSITORIES: Pride

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Action DRS
File_index.txt Txt
MaxQuant_Output_pYome.zip Other
MaxQuant_Output_proteome.zip Other
TO_Koch_230119_060219_pYome_025_R1.raw Raw
TO_Koch_230119_060219_pYome_025_R2.raw Raw
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Publications

Microenvironmental bystander cells are essential for the progression of chronic lymphocytic leukemia (CLL). We have discovered previously that LYN kinase promotes the formation of a microenvironmental niche for CLL. Here we provide mechanistic evidence that LYN regulates the polarization of stromal fibroblasts to support leukemic progression. LYN is overexpressed in fibroblasts of lymph nodes of CLL patients. LYN-deficient stromal cells reduce CLL growth in vivo. LYN-deficient fibroblasts show m  ...[more]

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