Proteomics

Dataset Information

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Shotgun proteomic data obtained from whole cell lysates of ´Geobacer ammonificans´


ABSTRACT: Dissimilatory nitrate reduction to ammonia (DNRA) is an important part of the microbial N-cycle both in natural and man-made habitats, although its significance in wastewater treatment plants is not well understood. Nitrate-limited enrichments from activated sludge with acetate as e-donor consistently resulted in a domination of two closely related genotypes of ammonifying members of Deltaproteobacteria belonging to the genus Geobacter. One of the two was isolated in pure culture which appears to be an extremely specialized ammonifier, actively growing only with acetate as e-donor and C source and nitrate as e-acceptor. The shotgun proteomic raw data obtained from whole cell lysates are provided. First and corresponding author: Dimitry Y. Sorokin soroc@inmi.ru; d.sorokin@tudelft.nl

INSTRUMENT(S): Q Exactive

ORGANISM(S): Geobacter

SUBMITTER: Martin Pabst  

LAB HEAD: Dr. Martin Pabst

PROVIDER: PXD031212 | Pride | 2023-07-11

REPOSITORIES: pride

Dataset's files

Source:
Action DRS
GEAM_SL_01_cleaned.fasta Fasta
MP_DIM_01122018_Met_2hr_DDA01.mgf Mgf
MP_DIM_01122018_Met_2hr_DDA01.mzXML Mzxml
MP_DIM_01122018_Met_2hr_DDA01.raw Raw
MP_DIM_01122018_Met_2hr_DDA02.mgf Mgf
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