Proteomics

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Novel protein interaction network of human calcitonin receptor-like receptor revealed by label-free quantitative proteomics


ABSTRACT: Background : The G protein-coupled receptor (GPCR) calcitonin receptor-like receptor (CLR) is implicated in cardiovascular and skin diseases, migraine and cancer. Beyond its agonists, receptor activity-modifying proteins and receptor component protein, interacting partners of this GPCR (‘CLR interactome’) are currently unknown. Herein, we defined CLR interactome in primary human dermal lymphatic endothelial cells (HDLEC). Immunoprecipitation (IP) of core- and terminally-glycosylated CLR and label-free quantitative mass spectrometry allowed the identification of 46 novel interaction partners from a total HDLEC proteome consisting of 4,902 proteins. Aims: The main aim of this study was to characterise the interactome of endogenous CLR along with the expression of this GPCR in the context of the proteomic profile of primary human dermal lymphatic endothelial cells cultured in vitro. Methods We used label-free quantitative proteomic analysis to analyse the CLR co-IP eluates and total protein lysates obtained from cultured in vitro primary human dermal lymphatic endothelial cells (from Promocell).

INSTRUMENT(S): Q Exactive HF-X

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Dermis Microvascular Lymphatic Vessel Endothelial Cell, Cell Culture

SUBMITTER: Dimitrios Manolis  

LAB HEAD: Holger Kramer

PROVIDER: PXD032156 | Pride | 2024-08-09

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
20210313_HDLEC-TL_PBS1_TR01.raw Raw
20210313_HDLEC-TL_PBS1_TR02.raw Raw
20210313_HDLEC-TL_PBS2_TR01.raw Raw
20210313_HDLEC-TL_PBS2_TR02.raw Raw
20210313_HDLEC-TL_PBS3_TR01.raw Raw
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Publications

Quantitative proteomics reveals CLR interactome in primary human cells.

Manolis Dimitrios D   Hasan Shirin S   Maraveyas Anthony A   O'Brien Darragh P DP   Kessler Benedikt M BM   Kramer Holger H   Nikitenko Leonid L LL  

The Journal of biological chemistry 20240520 6


The G protein-coupled receptor (GPCR) calcitonin receptor-like receptor (CLR) mediates essential functions in several cell types and is implicated in cardiovascular pathologies, skin diseases, migraine, and cancer. To date, the network of proteins interacting with CLR ("CLR interactome") in primary cells, where this GPCR is expressed at endogenous (physiologically relevant) levels, remains unknown. To address this knowledge gap, we established a novel integrative methodological workflow/approach  ...[more]

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