Proteomics

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MDA5 signaling in splenic B cells from imiquimod-induced lupus mouse model with proteomics study


ABSTRACT: Abstract Introduction Several environmental stimuli may influence lupus, especially viral infection. We utilize an imiquimod-induced lupus mouse model focusing on TLR7 pathway and use proteomics analysis to figure out the specific pathway related to viral infection and its related protein expressions in splenic B cells, hoping to get an insight on B cell responses to viral infection in lupus model. Material and methods. FVB/N wild type mouse was used treated with imiquimod for 8 weeks to induce lupus symptoms and signs, and splenocytes were retrieved, and B cells were selected and conducted proteomic analysis. The B cells were co-cultured with CD40L+ feeder cells for another one week before Western blot analysis. Panther pathway analysis was used to disclose the pathways activated and protein-protein interactome analyzed by STRING database in this lupus murine model. Results. The lupus model is well established and well demonstrated with serology evidence and pathology proof of lupus-mimic organ damage. Proteomics data of splenic B cells revealed the most important pathways activated (fold enrichment >100) were positive regulation of MDA-5 signaling pathway, negative regulation of IP-10 production, negative regulation of chemokine (C-X-C motif) ligand 2 production and positive regulation of RIG-I signaling pathway. A unique protein-protein interactome containing 10 genes was discovered, within which ISG15, IFIH1, IFIT1, DDX60, and DHX58 have been demonstrated to be downstream effectors of MDA5 signaling. Finally, B cells intracellular cytosolic proteins were determined with Western blot experiment and the MDA5-related pathway activation is still evident. Conclusion. In this experiment, we confirmed that the B cells in lupus murine model focusing on TLR7 pathway were activated through MDA5 signaling pathway, an important RNA sensor implicated in the detection of viral infections and autoimmune. The MDA5 agonists/antagonist RNAs and detailed molecular interactions inside B cells are worthy further investigation for lupus therapy.

INSTRUMENT(S): LTQ Orbitrap Elite

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Blood

SUBMITTER: Fu-An Li  

LAB HEAD: Fu-An Li

PROVIDER: PXD034855 | Pride | 2023-03-10

REPOSITORIES: Pride

Dataset's files

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20220620protein_abundance_for_analysis_AI_2forcsv.xlsx Xlsx
211021-TMT_F_A.raw Raw
211021-TMT_F_B.raw Raw
211021-TMT_F_C.raw Raw
211021-TMT_F_D.raw Raw
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Publications

A Study on MDA5 Signaling in Splenic B Cells from an Imiquimod-Induced Lupus Mouse Model with Proteomics.

Su Yu-Jih YJ   Li Fu-An FA   Sheu Jim Jinn-Chyuan JJ   Li Sung-Chou SC   Weng Shao-Wen SW   Shen Feng-Chih FC   Chang Yen-Hsiang YH   Chen Huan-Yuan HY   Liou Chia-Wei CW   Lin Tsu-Kung TK   Chuang Jiin-Haur JH   Wang Pei-Wen PW  

Cells 20221024 21


<h4>Introduction</h4>Several environmental stimuli may influence lupus, particularly viral infections. In this study, we used an imiquimod-induced lupus mouse model focused on the TLR7 pathway and proteomics analysis to determine the specific pathway related to viral infection and the related protein expressions in splenic B cells to obtain insight into B-cell responses to viral infection in the lupus model.<h4>Materials and methods</h4>We treated FVB/N wild-type mice with imiquimod for 8 weeks  ...[more]

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