Proteomics

Dataset Information

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Design and characterization of mutated variants of the oncotoxic parvoviral protein NS1


ABSTRACT: Oncotoxic proteins such as the non-structural protein 1 (NS1), a constituent of the rodent parvovirus H1 (H1-PV), offer a novel approach for treatment of tumors that are refractory to other treatments. In the present study, mutated NS1 variants were designed and tested with respect to their oncotoxic potential in human hepatocellular carcinoma cell lines. We introduced single point mutations of previously described important residues of the wild-type NS1 protein and a deletion of 114 base pairs localized within the N-terminal domain of NS1. Cell-viability screening with HepG2 and Hep3B hepatocarcinoma cells transfected with the constructed NS1-mutants led to identification of, the single-amino acid NS1-mutant NS1-T585E, which lead to a 30% decreased in cell viability as compared to NS1 wildtype. Using proteomics analysis, we could identify new interaction partners and signaling pathways of NS1. We could thus identify new oncotoxic NS1 variants and gain insight into the modes of action of NS1, which is exclusively toxic to human cancer cells. Our in-vitro studies provide mechanistic explanations for the observed oncolytic effects. The availability of new NS1 variants in combination with a better understanding of their modes of action offers new possibilities for the design of innovative cancer treatment strategies.

INSTRUMENT(S): Orbitrap Fusion Lumos, Q Exactive HF, LTQ Orbitrap Elite

ORGANISM(S): Homo Sapiens (human)

SUBMITTER: Katarzyna Buczak  

LAB HEAD: Alexander Schmidt

PROVIDER: PXD036350 | Pride | 2023-03-10

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
001_exp001_PO4_D19.raw Raw
001_exp1-TMT_TMT_C20.raw Raw
002_exp001_PO4_D19.raw Raw
002_exp1-TMT_TMT_C20.raw Raw
003_exp001_PO4_D19.raw Raw
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Publications

Design and Characterization of Mutated Variants of the Oncotoxic Parvoviral Protein NS1.

Hauswirth Patrick P   Graber Philipp P   Buczak Katarzyna K   Mancuso Riccardo Vincenzo RV   Schenk Susanne Heidi SH   Nüesch Jürg P F JPF   Huwyler Jörg J  

Viruses 20230111 1


Oncotoxic proteins such as the non-structural protein 1 (NS1), a constituent of the rodent parvovirus H1 (H1-PV), offer a novel approach for treatment of tumors that are refractory to other treatments. In the present study, mutated NS1 variants were designed and tested with respect to their oncotoxic potential in human hepatocellular carcinoma cell lines. We introduced single point mutations of previously described important residues of the wild-type NS1 protein and a deletion of 114 base pairs  ...[more]

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