Proteomics

Dataset Information

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Degradomic identification of membrane type 1-matrix metalloproteinase (MT1-MMP/MMP14) as an ADAMTS9 and ADAMTS20 substrate


ABSTRACT: ADAMTS9 and ADAMTS20 are homologous secreted proteases implicated in ECM proteolysis and ciliogenesis, but few relevant substrates of these proteases are currently known. Quantitative N-terminomics comparison of RPE-1 cells lacking ADAMTS9 with parental RPE-1 cells identified transmembrane protease MT1-MMP (MMP14) as a novel ADAMTS9 substrate. The resulting enhanced cell-surface MT1-MMP activity in the gene-edited cells contributes to their adhesion defect, but not lack of cilia. A key physiological function of ADAMTS9/20 may be to dampen cell-surface MT1-MMP activity.

INSTRUMENT(S): Orbitrap Fusion Lumos

ORGANISM(S): Homo Sapiens (human)

SUBMITTER: Daniel Martin  

LAB HEAD: Suneel Apte

PROVIDER: PXD036612 | Pride | 2023-07-20

REPOSITORIES: pride

Dataset's files

Source:
Action DRS
Lum_18mar1205-_1_.mzML Mzml
Lum_18mar1205-_1_.mzid.gz Mzid
Lum_18mar1205-_1_.pdResult Other
Lum_18mar1205-_1__Lysates_Master_sheet.xlsx Xlsx
Lum_18mar1205.raw Raw
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Publications

Degradomic Identification of Membrane Type 1-Matrix Metalloproteinase as an ADAMTS9 and ADAMTS20 Substrate.

Nandadasa Sumeda S   Martin Daniel D   Deshpande Gauravi G   Robert Karyn L KL   Stack M Sharon MS   Itoh Yoshifumi Y   Apte Suneel S SS  

Molecular & cellular proteomics : MCP 20230509 6


The secreted metalloproteases ADAMTS9 and ADAMTS20 are implicated in extracellular matrix proteolysis and primary cilium biogenesis. Here, we show that clonal gene-edited RPE-1 cells in which ADAMTS9 was inactivated, and which constitutively lack ADAMTS20 expression, have morphologic characteristics distinct from parental RPE-1 cells. To investigate underlying proteolytic mechanisms, a quantitative terminomics method, terminal amine isotopic labeling of substrates was used to compare the parenta  ...[more]

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