Proteomics

Dataset Information

0

Single bacterial species LC-MS/MS


ABSTRACT: Analysis of six types of single bacterial species, including Bacteroides vulgatus ATCC 8482,Bacteroides ovatus ATCC 8483, Bacteroides uniformis ATCC 8492, Blautia hydrogenotrophica DSM 10507, Bacteroides thetaiotaomicron ATCC 29148, Escherichia coli DSM 101114

INSTRUMENT(S): Q Exactive HF

ORGANISM(S): Bacteroides Uniformis Atcc 8492 Bacteroides Ovatus Atcc 8483 Blautia Hydrogenotrophica Dsm 10507 Phocaeicola Vulgatus Atcc 8482

TISSUE(S): Cell Culture

SUBMITTER: Kai Cheng  

LAB HEAD: Kai Cheng

PROVIDER: PXD037839 | Pride | 2023-03-11

REPOSITORIES: pride

Dataset's files

Source:
Action DRS
Data_S1-S14.7z Other
MetaLab_2_3_0_101114.7z Other
MetaLab_2_3_0_10507.7z Other
MetaLab_2_3_0_29148.7z Other
MetaLab_2_3_0_8482.7z Other
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Publications

MetaLab-MAG: A Metaproteomic Data Analysis Platform for Genome-Level Characterization of Microbiomes from the Metagenome-Assembled Genomes Database.

Cheng Kai K   Ning Zhibin Z   Li Leyuan L   Zhang Xu X   Serrana Joeselle M JM   Mayne Janice J   Figeys Daniel D  

Journal of proteome research 20221212 2


The studies of microbial communities have drawn increased attention in various research fields such as agriculture, environment, and human health. Recently, metaproteomics has become a powerful tool to interpret the roles of the community members by investigating the expressed proteins of the microbes. However, analyzing the metaproteomic data sets at genome resolution is still challenging because of the lack of efficient bioinformatics tools. Here we develop MetaLab-MAG, a specially designed to  ...[more]

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