Proteomics

Dataset Information

0

Identification of protein candidates in spermatozoa of water buffalo (Bubalus bubalis) bulls helps in predicting their fertility status


ABSTRACT: Abstract The water buffalo (Bubalus bubalis) is an indispensable part of the Indian dairy sector and in several instances, the farmers incur economic losses due to failed pregnancy after artificial insemination (AI). One of the key factors for the failure of conception is the use of semen from the bulls of low fertilizing potential and hence, it becomes important to predict the fertility status before performing AI. In this study, the global proteomic profile of high fertile (HF) and low fertile (LF) buffalo bull spermatozoa was established using a high-throughput LC-MS/MS technique. A total of 1385 proteins (≥ 1 high-quality PSM/s, ≥ 1 unique peptides, P < 0.05, FDR < 0.01) were identified out of which, 1002 were common between both the HF and LF groups while 288 and 95 proteins were unique to HF and LF groups respectively. We observed 211 and 342 significantly upregulated (log Fc ≥2) and downregulated in HF (log Fc ≤0.5) spermatozoa (p <0.05). Gene ontology analysis revealed that the fertility associated upregulated proteins were involved in spermatogenesis, sperm motility, acrosome integrity, zona pellucida binding and other associated sperm functions. Besides this, the downregulated proteins were involved in glycolysis, fatty acid degradation and inflammation. Furthermore, fertility related differentially abundant proteins (DAPs) on sperm viz., AKAP3, Sp17 and DLD were validated through Western blotting and immunocytochemistry which was in coherence with the LC-MS/MS data. The DAPs identified in this study may be used as potential protein candidates for predicting fertility in buffaloes. Our findings provide an opportunity in mitigating the economic losses that farmers incur due to male infertility.

INSTRUMENT(S): Q Exactive

ORGANISM(S): Bos Taurus (bovine)

SUBMITTER: Seema Karanwal  

LAB HEAD: Dr Rakesh Kumar

PROVIDER: PXD039680 | Pride | 2023-05-10

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
A1-1.raw Raw
A1-2.raw Raw
A1-3.raw Raw
A2-1.raw Raw
A2-2.raw Raw
Items per page:
1 - 5 of 49
altmetric image

Publications

Identification of protein candidates in spermatozoa of water buffalo (<i>Bubalus bubalis</i>) bulls helps in predicting their fertility status.

Karanwal Seema S   Pal Ankit A   Chera Jatinder Singh JS   Batra Vipul V   Kumaresan Arumugam A   Datta Tirtha K TK   Kumar Rakesh R  

Frontiers in cell and developmental biology 20230220


The water buffalo (<i>Bubalus bubalis</i>) is an indispensable part of the Indian dairy sector and in several instances, the farmers incur economic losses due to failed pregnancy after artificial insemination (AI). One of the key factors for the failure of conception is the use of semen from the bulls of low fertilizing potential and hence, it becomes important to predict the fertility status before performing AI. In this study, the global proteomic profile of high fertile (HF) and low fertile (  ...[more]

Similar Datasets

2024-07-25 | PXD050211 | Pride
2023-10-18 | PXD042286 | Pride
2022-08-01 | GSE207735 | GEO
2022-06-07 | GSE205404 | GEO
2014-12-24 | GSE46460 | GEO
2013-04-23 | E-GEOD-46274 | biostudies-arrayexpress
2011-06-10 | E-GEOD-29853 | biostudies-arrayexpress
2013-08-22 | E-GEOD-50091 | biostudies-arrayexpress
2017-12-13 | GSE87513 | GEO
2015-04-01 | GSE62728 | GEO