Proteomics

Dataset Information

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Multiomic temporal landscape of plasma and synovial fluid derived extracellular vesicles using an experimental model of equine osteoarthritis


ABSTRACT: Osteoarthritis (OA) is the most common equine joint disease characterised by cartilage degradation and changes to other joint tissues severely effecting welfare and performance leading to early retirement. It results in substantial morbidity and mortality, but our understanding of the pathophysiological mechanisms involved is limited. There are no disease modifying therapeutics available, with OA medication offering symptomatic relief only. Early diagnosis is thus important, as substantial joint pathology is usually present at the time of clinical diagnosis. Thus, biomarkers of early-stage OA are actively sought, and among these, extracellular vesicles (EVs) are emerging as potential candidates. Here we use a SWATH MS approach to profile the protein cargo of EVs derived from equine plasma and synovial fluid.

INSTRUMENT(S): TripleTOF 6600

ORGANISM(S): Equus Caballus (horse)

TISSUE(S): Blood Plasma, Extracellular Vesicle, Synovial Tissue

DISEASE(S): Osteoarthritis

SUBMITTER: Rosalind Jenkins  

LAB HEAD: Rosalind Elspeth Jenkins

PROVIDER: PXD041515 | Pride | 2023-10-24

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
EJC_SF_EVs_ion_library.txt Txt
EJC_SF_EVs_library_CEX15_231121.wiff Wiff
EJC_SF_EVs_library_CEX15_231121.wiff.scan Wiff
EJC_SF_EVs_library_CEX16_231121.wiff Wiff
EJC_SF_EVs_library_CEX16_231121.wiff.scan Wiff
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Publications

Multi-Omic Temporal Landscape of Plasma and Synovial Fluid-Derived Extracellular Vesicles Using an Experimental Model of Equine Osteoarthritis.

Anderson James R JR   Johnson Emily E   Jenkins Rosalind R   Jacobsen Stine S   Green Daniel D   Walters Marie M   Bundgaard Louise L   Hausmans Bas A C BAC   van den Akker Guus G   Welting Tim J M TJM   Chabronova Alzbeta A   Kharaz Yalda A YA   Clarke Emily J EJ   James Victoria V   Peffers Mandy J MJ  

International journal of molecular sciences 20231004 19


Extracellular vesicles (EVs) contribute to osteoarthritis pathogenesis through their release into joint tissues and synovial fluid. Synovial fluid-derived EVs have the potential to be direct biomarkers in the causal pathway of disease but also enable understanding of their role in disease progression. Utilizing a temporal model of osteoarthritis, we defined the changes in matched synovial fluid and plasma-derived EV small non-coding RNA and protein cargo using sequencing and mass spectrometry. D  ...[more]

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