Proteomics

Dataset Information

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Synthesis of flavonol-bearing probes and chemical proteomic analysis of Asteraceae petals in search of flavonoid enzymes


ABSTRACT: In flowers of Asteraceae, yellow flavonols bearing an additional hydroxyl group at positions 6 or 8 (ring A) contribute to petal UV-absorbing pigmentation patterns, which play a crucial role in attracting pollinating insects. Understanding the biogenesis of these special flavonols requires the identification of any specific enzyme involved in these incorporations of extra hydroxyl groups on the quercetin ring A. To this aim, flavonol-bearing biotinylated probes have been designed and synthesized to explore their ability to selectively capture target proteins or biosynthetic enzymes under oxidative activation. These probes demonstrate the ability to capture several flavonoid enzymes from Rudbeckia and Tagetes microsomes and allow the identification of uncharacterized candidates for novel flavonoid enzymes.

INSTRUMENT(S): Orbitrap Fusion Lumos

ORGANISM(S): Tagetes Erecta Rudbeckia Hirta

TISSUE(S): Plant Cell, Flower

SUBMITTER: Stéphane CHAIGNEPAIN  

LAB HEAD: Caroline Tokarski

PROVIDER: PXD041520 | Pride | 2023-07-20

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
BidF6H.fasta Fasta
Correspondence_table_new.xlsx Xlsx
Database_search_workflow.pptx Other
GGGQ01.1_proteomic.fasta Fasta
HigherFlavo200123_01_2x.raw Raw
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Publications

Synthesis of Flavonol-Bearing Probes for Chemoproteomic and Bioinformatic Analyses of Asteraceae Petals in Search of Novel Flavonoid Enzymes.

Kempf Karl K   Kempf Oxana O   Capello Yoan Y   Molitor Christian C   Lescoat Claire C   Melhem Rana R   Chaignepain Stéphane S   Génot Elisabeth E   Groppi Alexis A   Nikolski Macha M   Halbwirth Heidi H   Deffieux Denis D   Quideau Stéphane S  

International journal of molecular sciences 20230603 11


This study aimed at searching for the enzymes that are responsible for the higher hydroxylation of flavonols serving as UV-honey guides for pollinating insects on the petals of Asteraceae flowers. To achieve this aim, an affinity-based chemical proteomic approach was developed by relying on the use of quercetin-bearing biotinylated probes, which were thus designed and synthesized to selectively and covalently capture relevant flavonoid enzymes. Proteomic and bioinformatic analyses of proteins ca  ...[more]

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