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Pure and mixed crude extracts of Thauera aromatica K172 and Pseudomonas putida KT2440 for benchmarking GroEL-proteotyping

ABSTRACT: This dataset has been used to establish GroEL-proteotyping, a targeted proteotyping approach for assessing bacterial community compositions using the taxonomic marker protein GroEL. This dataset contains raw data of two experiments: 1. Pure cultures of T. aromatica (sample names: TA, TB, TC) and P. putida (sample names: PA, PB, PC) were analyzed individually after in-solution digestion 2. T. aromatica and P. putida were cultivated independently and crude extracts were mixed in defined ratios. GroEL was pre-separated by SDS-PAGE (sample names: LOD_..., in-gel digestion)

INSTRUMENT(S): Orbitrap Fusion

ORGANISM(S): Thauera Aromatica K172 Pseudomonas Putida Kt2440

SUBMITTER: Simon Klaes

LAB HEAD: Lorenz Adrian

PROVIDER: PXD046460 | Pride | 2023-10-27

REPOSITORIES: Pride

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Dataset's files

Source:

			Action	DRS
	GroEL_database.tsv	Tabular
	LOD_MetaProSIP_Output.tsv	Tabular
	LOD_T10P90_01.raw	Raw
	LOD_T10P90_02.raw	Raw
	LOD_T10P90_03.raw	Raw

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