Proteomics

Dataset Information

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A common gene signature of the right ventricle in failing rat and human hearts


ABSTRACT: The molecular mechanisms of progressive right heart failure are incompletely understood. We systematically examined transcriptomic changes occurring over months in isolated cardiomyocytes or whole heart tissues from failing right and left ventricles in rat models of pulmonary artery (PAB) or aortic banding (AOB). Detailed bioinformatics analyses resulted in the identification of gene signatures, protein, and transcription factor networks specific to ventricles and compensated or decompensated disease states. Proteomic and RNA-FISH analyses confirmed PAB-mediated regulation of key genes (including proenkephalin) and revealed spatially heterogeneous mRNA expression in the heart. Intersection of rat PAB-specific gene sets with transcriptome data sets from human patients with chronic thromboembolic pulmonary hypertension led to the identification of more than 50 genes whose expression levels correlated with the severity of right heart disease, including multiple matrix-regulating and secreted factors. These data define a conserved, differentially regulated genetic network associated with right heart failure in rats and humans

INSTRUMENT(S): Orbitrap Fusion Lumos

ORGANISM(S): Rattus Norvegicus (rat)

TISSUE(S): Heart

DISEASE(S): Cardiovascular System Disease

SUBMITTER: XIAOKE YIN  

LAB HEAD: Prof Manuel Mayr

PROVIDER: PXD047022 | Pride | 2024-04-11

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
AOB_PAB_LVRV_TMT1_F01.raw Raw
AOB_PAB_LVRV_TMT1_F02.raw Raw
AOB_PAB_LVRV_TMT1_F03.raw Raw
AOB_PAB_LVRV_TMT1_F04.raw Raw
AOB_PAB_LVRV_TMT1_F05.raw Raw
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