Dataset Information
Untargeted virus identification in fecal samples from publicly available proteomes
Ontology highlight
ABSTRACT:
INSTRUMENT(S): Q Exactive
ORGANISM(S): Segatella Copri Faecalibacterium Prausnitzii Rotavirus A Human/vanderbilt/vu08-09-24/2008/g3p[8] Blastocystis Hominis Phocaeicola Massiliensis Faecalicatena Fissicatena Norwalk-like Virus Bacteroides Fragilis
TISSUE(S): Feces
DISEASE(S): Gastrointestinal System Disease
SUBMITTER: 
Jean ARMENGAUD
LAB HEAD: Jean Armengaud
PROVIDER: PXD050353 | Pride | 2024-11-06
REPOSITORIES: Pride
Dataset's files
| Action | DRS | |||
|---|---|---|---|---|
| 150924QXc1_RB-0965-150922-002_007.mgf | Mgf | |||
| 150924QXc1_RB-0965-150922-002_007.raw | Raw | |||
| 150924QXc1_RB-0965-150922-004_011.mgf | Mgf | |||
| 150924QXc1_RB-0965-150922-004_011.raw | Raw | |||
| F484415.dat | Other |
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Publications
Universal Identification of Pathogenic Viruses by Liquid Chromatography Coupled with Tandem Mass Spectrometry Proteotyping.
Molecular & cellular proteomics : MCP 20240730 10
Accurate and rapid identification of viruses is crucial for an effective medical diagnosis when dealing with infections. Conventional methods, including DNA amplification techniques or lateral-flow assays, are constrained to a specific set of targets to search for. In this study, we introduce a novel tandem mass spectrometry proteotyping-based method that offers a universal approach for the identification of pathogenic viruses and other components, eliminating the need for a priori knowledge of ...[more]
