Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Neisseria meningitidis

ABSTRACT: Draft genome sequences of Neisseria meningitidis strains isolated in Japan from 2003 to 2011

PROVIDER: PRJDB11583 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	DRR291236_1.fastq.gz	Fastqsanger.gz
	DRR291236_2.fastq.gz	Fastqsanger.gz
	DRR291237_1.fastq.gz	Fastqsanger.gz
	DRR291237_2.fastq.gz	Fastqsanger.gz
	DRR291238_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 178

Similar Datasets

Neisseria meningitidis

Project description:Draft genome sequences of Neisseria meningitidis strains isolated in Japan

| PRJDB11955 | ENA

Neisseria meningitidis

Project description:Draft genome sequences of Neisseria meningitidis strains isolated in Japan in 2017

| PRJDB11354 | ENA

Neisseria meningitidis

Project description:Draft genome sequences of Neisseria meningitidis strains isolated in Japan from 2018 to 2020

| PRJDB11607 | ENA

Neisseria meningitidis

Project description:Draft genome sequences of Neisseria meningitidis strains isolated in Japan from 2012 to 2016

| PRJDB11606 | ENA

Comparative genomic hybridization of one Neisseria cinerea, two Neisseria lactamica, two Neisseria gonorrhoeae, and 48 Neisseria meningitidis isolates

Project description:Microarray comparative genome hybridization (mCGH) data was collected from one Neisseria cinerea, two Neisseria lactamica, two Neisseria gonorrhoeae, and 48 Neisseria meningitidis isolates. For N. meningitidis, these isolates are from diverse clonal complexes, invasive and carriage strains, and all major serogroups. The microarray platform represented N. meningitidis strains MC58, Z2491, and FAM18 and N. gonorrhoeae FA1090.

2007-04-04 | E-TIGR-129 | biostudies-arrayexpress

Zur regulon of Neisseria meningitidis

Project description:The zur regulon in Neisseria meningitidis was elucidated in the strain MC58 using a zur knockout strain and conditions which activate Zur ( zinc supplementation in the medium)

2012-10-05 | GSE38033 | GEO

Neisseria meningitidis

Project description:Draft genome sequences of Neisseria meningitidis strains belong to ST-2057

| PRJDB11236 | ENA

Characterization of ST-4821 complex, a unique Neisseria meningitidis clone

Project description:Neisseria meningitidis is the leading cause of bacterial meningitis and septicemia worldwide. The novel ST-4821 clonal complex caused several serogroup C meningococcal outbreaks unexpectedly during 2003–2005 in China. We fabricated a whole-genome microarray of Chinese N. meningitidis serogroup C representative isolate 053442 and characterized 27 ST-4821 complex isolates which were isolated from different serogroups using comparative genomic hybridization (CGH) analysis. This paper provides important clues which are helpful to understand the genome composition and genetic background of different serogroups isolates, and possess significant meaning to the study of the newly emerged hyperinvasive lineage. Keywords: comparative genomic hybridization

2007-11-28 | GSE7780 | GEO

Neisseria meningitidis

Project description:Draft genome sequences of Neisseria meningitidis strains belong to ST-2057 complex

| PRJDB10539 | ENA

Processing-Independent CRISPR RNAs Limit Natural Transformation in Neisseria meningitidis

Project description:In bacteria and archaea, CRISPR loci confer adaptive, sequence-based immunity against viruses and plasmids. CRISPR interference is specified by CRISPR RNAs (crRNAs) that are transcribed and processed from CRISPR spacers and repeats. Pre-crRNA processing is essential for CRISPR interference in all systems studied thus far. Here we examine crRNA biogenesis and CRISPR interference in naturally competent Neisseria spp., including the human pathogen N. meningitidis. Our studies reveal a unique crRNA maturation pathway in which crRNA transcription is driven by promoters that are embedded within each repeat, yielding crRNA 5’ ends are not formed by processing. Although crRNA 3’ end formation occurs through RNase III cleavage of a pre-crRNA/tracrRNA duplex, as in other Type II CRISPR systems, this processing event is dispensable for interference. The meningococcal pathway is the most streamlined CRISPR/cas system characterized to date. Endogenous CRISPR spacers frequently target genomic sequences of other Neisseria strains and so limit natural transformation, which is the primary source of genetic variation that contributes to immune evasion, antibiotic resistance, and virulence in N. meningitidis.

2013-04-23 | GSE44582 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data