Project description:Mycobacterium chimaera is a nontuberculous mycobacterial species that causes cardiovascular, pulmonary, and postsurgical infections. Here, we report the first complete genome sequence of M. chimaera This genome is 6.33 Mbp, with a G+C content of 67.56%, and encodes 4,926 protein-coding genes, as well as 74 tRNAs, one ncRNA, and three rRNA genes.
Project description:Purpose: The goal is to investigate how to enhance the adaptability of deep-sea bacterium Shewanella piezotolerans WP3 to low temperature and high pressure by experimental evolution with H2O2 stress
2017-10-31 | GSE99297 | GEO
Project description:Vision using multiple distinct rod opsins in deep-sea fishes
Project description:Here we report the massively parallel cDNA sequencing (RNA-seq) analysis performed using high throughput sequencing of wild type (DB110) and toxR (TW30) mutant strains of the deep-sea bacterium Photobacterium profundum. ToxR is a transmembrane DNA-binding protein first discovered in Vibrio cholerae and able to regulate numerous genes involved in virulence. In P. profundum the abundance and activity of the same protein is influenced by hydrostatic pressure and is able to regulate genes in a pressure-dependent manner. To better characterize the ToxR regulon, we have compared the genes differentially expressed in response to pressure changes with those whose expression is altered between wild type and toxR mutant strains.
2012-12-22 | GSE38259 | GEO
Project description:MIG-seq data of 36 genera of Japanese flowering plants
