Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Mus musculus strain:C57BL/6N

ABSTRACT: Mouse PGC DNA methylome (PBAT)

PROVIDER: PRJDB145 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	DRR022350_1.fastq.gz	Fastqsanger.gz
	DRR022350_2.fastq.gz	Fastqsanger.gz
	DRR022351_1.fastq.gz	Fastqsanger.gz
	DRR022351_2.fastq.gz	Fastqsanger.gz
	DRR022352.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 54

Similar Datasets

Mus musculus strain:C57BL/6N, C57BL/6J

Project description:Mouse DNA methylome (PBAT)

| PRJDB20 | ENA

Mus musculus strain:C57BL/6N

Project description:Mouse NS/PCs DNA methylome (PBAT)

| PRJDB5230 | ENA

Mus musculus strain:C57BL/6N, 129SvJae x C57BL/6N

Project description:Mouse DNA methylome (WBA-seq)

| PRJDB19 | ENA

Mus musculus strain:C57BL/6N, C57BL/6J

Project description:Mouse DNA methylome (MethylC-seq)

| PRJDB18 | ENA

Project description: Not available

| S-EPMC6924556 | biostudies-literature

Mus musculus strain:C57BL/6N mice

Project description:Repetitive DNA methylome analysis by single cell shotgun bisulfite sequencing

| PRJDB4194 | ENA

Mus musculus strain:C576BL/6N

Project description:Mouse blactocyst methylome

| PRJDB6821 | ENA

Characterizing phenotypic data of Peromyscus leucopus compared to C57BL/6J Mus musculus and diversity outbred (DO) Mus musculus.

Project description:Translational research is commonly performed in the C57B6/J mouse strain, chosen for its genetic homogeneity and phenotypic uniformity. Here, we evaluate the suitability of the white-footed deer mouse (Peromyscus leucopus) as a model organism for aging research, offering a comparative analysis against C57B6/J and diversity outbred (DO) Mus musculus strains. Our study includes comparisons of body composition, skeletal muscle function, and cardiovascular parameters, shedding light on potential applications and limitations of P. leucopus in aging studies. Notably, P. leucopus exhibits distinct body composition characteristics, emphasizing reduced muscle force exertion and a unique metabolism, particularly in fat mass. Cardiovascular assessments showed changes in arterial stiffness, challenging conventional assumptions and highlighting the need for a nuanced interpretation of aging-related phenotypes. Our study also highlights inherent challenges associated with maintaining and phenotyping P. leucopus cohorts. Behavioral considerations, including anxiety-induced responses during handling and phenotyping assessment, pose obstacles in acquiring meaningful data. Moreover, the unique anatomy of P. leucopus necessitates careful adaptation of protocols designed for Mus musculus. While showcasing potential benefits, further extensive analyses across broader age ranges and larger cohorts are necessary to establish the reliability of P. leucopus as a robust and translatable model for aging studies.

| S-EPMC11335981 | biostudies-literature

Mus musculus strain:GV oocytes wild type (C57BL/6N), GV Dnmt knockout mice (hybrid genetic background, 129SvJae?C57BL/6N)

Project description:Mouse oocyte methylome

| PRJDB101 | ENA

Mus spretus LINE-1s in the Mus musculus domesticus inbred strain C57BL/6J are from two different Mus spretus LINE-1 subfamilies.

Project description:A LINE-1 element, LIC105, was found in the Mus musculus domesticus inbred strain, C57BL/6J. Upon sequencing, this element was found to belong to a M. spretus LINE-1 subfamily originating within the last 0.2 million years. This is the second spretus-specific LINE-1 subfamily found to be represented in C57BL/6J. Although it is unclear how these M. spretus LINE-1s transferred from M. spretus to M. m. domesticus, it is now clear that at least two different spretus LINE-1 sequences have recently transferred. The limited divergence between the C57BL/6J spretus-like LINE-1s and their closest spretus ancestors suggests that the transfer did not involve an exceptionally long lineage of sequential transpositions.

| S-EPMC1206987 | biostudies-other

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data