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Liriope muscari

ABSTRACT: Genetic structure of the Liriope muscari polyploid complex and the possibility of its disturbance by human activity in Japan

PROVIDER: PRJDB14549 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	DRR412610_1.fastq.gz	Fastqsanger.gz
	DRR412610_2.fastq.gz	Fastqsanger.gz
	DRR412611_1.fastq.gz	Fastqsanger.gz
	DRR412611_2.fastq.gz	Fastqsanger.gz
	DRR412612_1.fastq.gz	Fastqsanger.gz

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Liriope muscari

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Project description:Five phenolic compounds, namely N-trans-coumaroyltyramine (1), N-trans-feruloyltyramine (2), N-trans-feruloyloctopamine (3), 5,7-dihydroxy-8-methoxyflavone (4) and (3S)3,5,4'-trihydroxy-7-methoxy-6-methylhomoisoflavanone (5), were isolated from the fibrous roots of Liriope muscari (Liliaceae). Compounds 2-5 were isolated for the first time from the Liriope genus. Their in vitro antioxidant activities were assessed by the DPPH and ABTS scavenging methods with microplate assays. The structure-activity relationships of compounds 1-3 are discussed.

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Disentangling a polyploid complex within Crocus series Verni

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Cryptic diversity in the Antherospora vaillantii complex on Muscari species.

Project description:The anther smut fungi in the ustilaginomycetous genus Antherospora (Floromycetaceae, Urocystidales) that infect monocots, are currently placed in nine species. Against the background of the generally observed high host specificity in smut fungi, the broad host range reported for some of the species suggests much higher diversity. Antherospora vaillantii s. lato includes anther smuts on different Muscari species. In this study, specimens of anther smuts on Muscari armeniacum, M. botryoides, M. comosum, and M. tenuiflorum were analysed by rDNA sequences and morphology to determine whether they represented one polyphagous or several host specific species. The molecular phylogeny revealed three distinct lineages that were correlated with host plants, yet had only slight morphological differences. These lineages are assigned to three cryptic species: Antherospora hortensis sp. nov. on Muscari armeniacum, A. muscari-botryoidis comb. nov. (syn. Ustilago muscari-botryoidis) on M. botryoides, and A. vaillantii s. str. on M. comosum and M. tenuiflorum. All species on Muscari form a monophyletic group within Antherospora, and the phylogenetic relations within this group coincide well with the subgeneric classification of the respective host species. This indicates a common ancestry of Muscari anther smuts and co-evolution as a driver of their diversification.

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A new eudesmane sesquiterpene glucoside from Liriope muscari fibrous roots.

Project description:The screening of several Chinese medicinal herbs for nematocidal properties showed that the ethanol extract of Liriope muscari fibrous roots possessed significant nematocidal activity against the pine wood nematode (Bursaphelenchus xylophilus). From the ethanol extract, a new constituent (1,4-epoxy-cis-eudesm-6-O-β-D-glucopyranoside) and three known glycosides [1β,6α-dihydroxy-cis-eudesm-3-ene-6-O-β-D-glucopyranoside (liriopeoside A), 1β,6β-dihydroxy-cis-eudesm-3-ene-6-O-β-D-glucopyranoside, and 1α,6β-dihydroxy-5,10-bis-epi-eudesm-4(15)-ene-6-O-β D-glucopyranoside] were isolated by bioassay-guided fractionation. The structures were elucidated by 1D and 2D NMR and MS techniques. 1,4-Epoxy-cis-eudesm-6-O-β-D-glucopyranoside possessed moderate nemato-cidal activity against B. xylophilus with a LC(50 )value of 339.76 μg/mL, while liriopeoside A (LC(50) = 82.84 μg/mL) and 1β,6β-dihydroxy-cis-eudesm-3-ene-6-O-β-D-glucopyranoside (LC(50) = 153.39 μg/mL) also exhibited nematocidal activity against B. xylophilus. The crude extract of L. muscari fibrous roots exhibited nematocidal activity against the pine wood nematode with a LC(50) value of 182.56 μg/mL.

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Development of decidual cell polyploidy and bi-nucleation necessitates mitochondrial activity

Project description:In the present study, to better define the aspects of decidual cell polyploidy, we isolated pure polyploid and non-polyploid decidual cell populations from the in vivo decidual bed. Three independent RNA pools prepared for each population were then subjected to the Affymetrix gene chip analysis for the whole mouse genome transcripts. Our data revealed up-regulation of 1015 genes and down-regulation of 1207 genes in the polyploid populations, as compared to the non-polyploid group. We analyzed whole gnenome transcription from non-polyploid and polyploid cell populations using the Affymetrix GeneChip® Mouse Gene 1.0 ST Array . 3 replicates were performed.

2011-04-29 | E-GEOD-28917 | biostudies-arrayexpress

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