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Pseudoalteromonas

ABSTRACT: Pseudoalteromonas sp. 520P1 genome sequencing project

PROVIDER: PRJDB1722 | ENA |

REPOSITORIES: ENA

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Dataset's files

Source:

			Action	DRS
	BBIN01.dat.gz	Other
	BBIN01.fasta.gz	Fasta.gz
	BBIN01.master.dat	Other
	BBZB01.dat.gz	Other
	BBZB01.fasta.gz	Fasta.gz

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Transcriptome profiling of planktonic stage to biofilm stage of deep sea bacterium Pseudoalteromonas sp. SM9913

Project description:We compared genetic profiles of planktonic stage to biofilm stage of deep sea bacterium Pseudoalteromonas sp. SM9913 and revealed genetic features during switch from planktonic to pellicle stage in Pseudoalteromonas sp. SM9913. mRNA profiles of Pseudoalteromonas sp. SM9913 planktonic cells, initial pellicle cells and mature pellicle cells were generated by Illumina Hiseq2000.

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Project description:One of the most distinct features of Pseudoalteromonas sp. SCSIO 11900 is its ability to form a very robust pellicle than most Pseudoalteromonas strains. Thus we want to identify the genes essential for the pellicle formation of SCSIO 11900. We compared transcriptom profiles of planktonic cells, initial pellicle and mature pellicle of coral Pseudoalteromonas sp. SCSIO 11900 and revealed that some unique genes from horizontal gene transfer is involved in the pellicle formation of SCSIO 11900.

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Genome-wide transcriptional response of the Arctic bacterium Pseudoalteromonas sp. A2 to oxidative stress

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