Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Tulip mild mottle mosaic virus

ABSTRACT: First complete genome sequence of tulip mild mottle mosaic virus

PROVIDER: PRJDB18332 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	DRR576617_1.fastq.gz	Fastqsanger.gz
	DRR576617_2.fastq.gz	Fastqsanger.gz
	DRR576618_1.fastq.gz	Fastqsanger.gz
	DRR576618_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 4 of 4

Similar Datasets

Cucumber green mottle mosaic virus

Project description:Cucumber green mottle mosaic virus Raw sequence reads

| PRJNA454023 | ENA

Tomato mottle mosaic virus cultivar:tomato

Project description:Tomato mottle mosaic virus cultivar:tomato Raw sequence reads

| PRJNA689058 | ENA

Brome mosaic virus

Project description:Brome mosaic virus complete genome sequencing

| PRJNA718423 | ENA

Zea mays strain:Sugarcane mosaic virus, Maize chlorotic mottle virus | breed:B73

Project description:Zea mays strain:Sugarcane mosaic virus, Maize chlorotic mottle virus | breed:B73 Transcriptome or Gene expression

| PRJNA530798 | ENA

Ryegrass mottle virus genome

Project description:Ryegrass mottle virus complete genome determination and development of infectious cDNA

| PRJEB65275 | ENA

tobacco mild green mosaic virus (TMGMV)

Project description:Tobacco mild green mosaic virus (TMGMV) isolates from different plant families show no evidence of differential adaptation to their host of origin

| PRJNA1044281 | ENA

Myc mild overexpression in the heart in a mosaic fashion induces matabolic changes and triggers hipertrophic protection pathways without a pathological phenotype

Project description:Recently, it was described that mammalian cells are able to eliminate those with relative lower Myc levels in the epiblast through cell competition. We have described that cardiomyocytes during heart development are also able to complete eliminating cells with lower Myc levels. We have also shown that adult cardiomyocytes respond in the same way over long periods of time when cell competition is induced by overexpressing Myc in a mosaic fashion. We therefore have developed an RNASeq assay to further understand the mechanism of elimination of WT cells and the effect of mild Myc overexpression in cardiomyocytes. Myc overexpression in a mosaic fashion in adult cardiomyocytes, 2 hearts were analyzed and two wild type littermates were used as controls

2014-09-26 | E-GEOD-58858 | biostudies-arrayexpress

Myc mild overexpression in the heart in a mosaic fashion induces matabolic changes and triggers hipertrophic protection pathways without a pathological phenotype

2014-09-26 | GSE58858 | GEO

Complete Genomic RNA Sequence of Tuberose Mild Mosaic Virus and Tuberose Mild Mottle Virus Acquired by High-Throughput Sequencing.

Project description:Tuberose (Polianthes tuberosa) is an ornamental flowering crop of the Amaryllidaceae family. Tuberose mild mosaic virus (TuMMV) and tuberose mild mottle virus (TuMMoV), members of the genus Potyvirus, are ubiquitously distributed in most tuberose growing countries worldwide with low biological incidence. Here, we report the first coding-complete genomic RNA of TuMMV and TuMMoV obtained through high-throughput sequencing (HTS) and further, the presence of both the viruses were confirmed using virus-specific primers in RT-PCR assays. Excluding the poly (A) tail, the coding-complete genomic RNA of TuMMV and TuMMoV was 9485 and 9462 nucleotides (nts) in length, respectively, and contained a single large open reading frame (ORF). Polyprotein encoded by both the viral genomes contained nine putative cleavage sites. BLASTn analysis of TuMMV and TuMMoV genomes showed 72.40-76.80% and 67.95-77% nucleotide sequence similarities, respectively, with the existing potyviral sequences. Phylogenetic analysis based on genome sequences showed that TuMMV and TuMMoV clustered in a distinct clade to other potyviruses. Further studies are required to understand the mechanism of symptom development, distribution, genetic variability, and their possible threat to tuberose production in India.

| S-EPMC9412269 | biostudies-literature

Bean common mosaic virus

Project description:Complete genome sequence of bean common mosaic virus from black bean in Vietnam

| PRJDB16961 | ENA