Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Aeromonas caviae

ABSTRACT: Whole genome sequencing of Aeromonas caviae, an opportunistic pathogen

PROVIDER: PRJDB1879 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	DRR015611_1.fastq.gz	Fastqsanger.gz
	DRR015611_2.fastq.gz	Fastqsanger.gz
	DRR015612_1.fastq.gz	Fastqsanger.gz
	DRR015612_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 4 of 4

Similar Datasets

Aeromonas caviae infection, 24 hours

Project description:Aeromonas caviae has been associated with human gastrointestinal disease. Strains of this species typically lack virulence factors (VFs) such as enterotoxins and hemolysins that are produced by other human pathogens of the Aeromonas genus. Microarray profiling of murine small intestinal extracts, 24 hours after oral infection with an A. caviae strain, provides evidence of a Th1 type immune response. A large number of gamma-interferon (γ-IFN) induced genes are up-regulated as well as several tumor necrosis factor-alpha (TNF-α) transcripts. A. caviae has always been considered an opportunistic pathogen because it lacks obvious virulence factors. This current effort suggests A. caviae colonizes murine intestinal tract and causes what has been described by others as a dysregulatory cytokine response leading to an irritable bowel-like syndrome. This response would explain why a number of diarrheal waterborne outbreaks have been attributed to A. caviae even though it lacks obvious enteropathogenic properties. Keywords: Aeromonas caviae, infection, disease mechanism, TH1 resposne

2007-01-20 | GSE6765 | GEO

Transcription profiling of mouse with Aeromonas caviae infection, 24 hours

Project description:Aeromonas caviae has been associated with human gastrointestinal disease. Strains of this species typically lack virulence factors (VFs) such as enterotoxins and hemolysins that are produced by other human pathogens of the Aeromonas genus. Microarray profiling of murine small intestinal extracts, 24 hours after oral infection with an A. caviae strain, provides evidence of a Th1 type immune response. A large number of gamma-interferon (γ-IFN) induced genes are up-regulated as well as several tumor necrosis factor-alpha (TNF-α) transcripts. A. caviae has always been considered an opportunistic pathogen because it lacks obvious virulence factors. This current effort suggests A. caviae colonizes murine intestinal tract and causes what has been described by others as a dysregulatory cytokine response leading to an irritable bowel-like syndrome. This response would explain why a number of diarrheal waterborne outbreaks have been attributed to A. caviae even though it lacks obvious enteropathogenic properties. Experiment Overall Design: Biological replicates (n=5), controls are uninfected mice, test replicates are infected with organism

2008-11-07 | E-GEOD-6765 | biostudies-arrayexpress

Aeromonas caviae

Project description:Whole genome sequencing of Aeromonas caviae, an opportunistic pathogen

| PRJDB2667 | ENA

Effect of conditioned media from Aeromonas caviae on the transcriptomic changes of the porcine isolates of Pasteurella multocida

Project description:To investigate the interaction between two porcine isolates of P. multocida (PM2 for type D and PM7 for type A) with Aeromonas caviae by co-culturing P. multocida in the conditioned media prepared from A. caviae

2022-12-01 | GSE211697 | GEO

Aeromonas caviae

Project description:Aeromonas caviae Genome sequencing

| PRJNA1197691 | ENA

Aeromonas caviae

Project description:Aeromonas caviae Genome sequencing and assembly

| PRJNA902936 | ENA

Aeromonas caviae

Project description:Aeromonas caviae Genome sequencing and assembly

| PRJNA799930 | ENA

Aeromonas caviae

Project description:Aeromonas caviae Genome sequencing and assembly