Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Cryptocercus punctulatus

ABSTRACT: Transcriptome sequencing of the wood-feeding cockroach Cryptocercus punctulatus

PROVIDER: PRJDB4695 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	DRR058700_1.fastq.gz	Fastqsanger.gz
	DRR058700_2.fastq.gz	Fastqsanger.gz
	DRR058701_1.fastq.gz	Fastqsanger.gz
	DRR058701_2.fastq.gz	Fastqsanger.gz
	DRR058702_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 8

Similar Datasets

Cryptocercus punctulatus

Project description:Cryptocercus punctulatus overview

| PRJNA1122263 | ENA

Blattabacterium sp. (Cryptocercus punctulatus) str. Cpu

Project description:Blattabacterium sp. (Cryptocercus punctulatus) Genome Sequencing

| PRJNA71047 | ENA

Cryptocercus punctulatus

Project description:RNA sequencing of the head parts from nymphs and adults of both sexes in the woodroaches Cryptocercus punctulatus

| PRJDB18224 | ENA

Cryptocercus punctulatus isolate:SP1-20161015

Project description:Cryptocercus punctulatus isolate:SP1-20161015 Raw sequence reads

| PRJNA1023012 | ENA

Bacteroidales

Project description:Barbulanympha ectosymbiont genomes from the hindgut of the wood-eating cockroach Cryptocercus punctulatus

| PRJNA278755 | ENA

Psammophis punctulatus

Project description:Psammophis punctulatus

| PRJNA1151995 | ENA

Hylophylax punctulatus

Project description:Hylophylax punctulatus

| PRJNA959790 | ENA

Blattabacterium punctulatus

Project description:Blattabacterium punctulatus overview

| PRJNA71837 | ENA

Othius punctulatus

Project description:Othius punctulatus overview

| PRJNA980373 | ENA

Gut Bacterial Community of the Xylophagous Cockroaches Cryptocercus punctulatus and Parasphaeria boleiriana.

Project description:Cryptocercus punctulatus and Parasphaeria boleiriana are two distantly related xylophagous and subsocial cockroaches. Cryptocercus is related to termites. Xylophagous cockroaches and termites are excellent model organisms for studying the symbiotic relationship between the insect and their microbiota. In this study, high-throughput 454 pyrosequencing of 16S rRNA was used to investigate the diversity of metagenomic gut communities of C. punctulatus and P. boleiriana, and thereby to identify possible shifts in symbiont allegiances during cockroaches evolution. Our results revealed that the hindgut prokaryotic communities of both xylophagous cockroaches are dominated by members of four Bacteria phyla: Bacteroidetes, Firmicutes, Proteobacteria, and Actinobacteria. Other identified phyla were Spirochaetes, Planctomycetes, candidatus Saccharibacteria (formerly TM7), and Acidobacteria, each of which represented 1-2% of the total population detected. Community similarity based on phylogenetic relatedness by unweighted UniFrac analyses indicated that the composition of the bacterial community in the two species was significantly different (P < 0.05). Phylogenetic analysis based on the characterized clusters of Bacteroidetes, Spirochaetes, and Deltaproteobacteria showed that many OTUs present in both cockroach species clustered with sequences previously described in termites and other cockroaches, but not with those from other animals or environments. These results suggest that, during their evolution, those cockroaches conserved several bacterial communities from the microbiota of a common ancestor. The ecological stability of those microbial communities may imply the important functional role for the survival of the host of providing nutrients in appropriate quantities and balance.

| S-EPMC4824515 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data