Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Helicobacter pylori

ABSTRACT: Methylome diversity in Helicobacter pylori East Asian isolates (Japan, family and microevolution)

PROVIDER: PRJDB5841 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	DRR097337_subreads.fastq.gz	Fastqsanger.gz
	DRR097338_subreads.fastq.gz	Fastqsanger.gz
	DRR097339_subreads.fastq.gz	Fastqsanger.gz
	DRR097340_subreads.fastq.gz	Fastqsanger.gz
	DRR097341_subreads.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 10

Similar Datasets

Helicobacter pylori

Project description:Methylome diversity in Helicobacter pylori East Asian isolates (Japan, Hokkaido, Okinawa and Fukui)

| PRJDB5843 | ENA

Helicobacter pylori

Project description:Methylome diversity in Helicobacter pylori East Asian isolates (India)

| PRJDB5842 | ENA

Helicobacter pylori

Project description:Methylome diversity in Helicobacter pylori East Asian isolates (China,YN)

| PRJDB5840 | ENA

Helicobacter pylori

Project description:Methylome diversity in Helicobacter pylori East Asian isolates (China, Q_5)

| PRJDB5839 | ENA

Expression data from AGS cells with Helicobacter pylori infection

Project description:Helicobacter pylori (H. pylori) is a human pathogen that infects almost half of the world’s population. Infection with H. pylori is frequently associated with chronic gastritis and can even lead to gastric and duodenal ulcers and gastric cancer. Although the persistent colonization of H. pylori and the development of H. pylori-associated gastritis remain poorly understood, it is believed that, in gastric mucosa, the modulated gastric epithelial cells (GECs) by H. pylori are key contributors. We used microarrays to detail the global programme of gene expression in Helicobacter pylori infected-gastric epithelial cell line AGS cells and identified up-regulated genes induced by Helicobacter pylori infection.

2024-04-18 | GSE264263 | GEO

Helicobacter pylori F57

Project description:Helicobacter pylori methylome analysis

| PRJDB2329 | ENA

Helicobacter pylori pathogenic mechanism

Project description:Helicobacter pylori infection reprograms host gene expression and influences various cellular processes, which have been investigated by cDNA microarray in vitro culture cells and in vivo patients of the chronic abdominal complaint. In this study，the effects of H. pylori infection on host gene expression in the gastric antral mucosa of patients with chronic gastritis were examined.

2012-04-30 | GSE30042 | GEO

Macrophage Responses to Helicobacter pylori

Project description:The purpose of this study was to examine macrophage proteomic changes induced by Helicobacter pylori. Macrophages utilized were the RAW 264.7 murine cell line. Macrophages were treated with H. pylori for 24 hours. The experimental design was a 4-plex isobaric tags for relative and absolute quantification (iTRAQ). In addition to uninfected control and H. pylori infected, the additional two conditions included an inhibitor of deoxyhypusine synthase (N1-guanyl-1,7-diamine-heptane, 1-(7-ammonioheptyl)guanidinium sulfate; GC7) an enzyme involved in the hypusination translation pathway, and the inhibitor plus H. pylori.

2020-05-26 | PXD010082 | Pride

Transcriptome analysis of AGS cells infected with Helicobacter pylori P12

Project description:Transcriptome analysis of AGS cells infected with Helicobacter pylori P12

2018-09-17 | GSE73226 | GEO

Global transcriptome analysis of macrophages during Helicobacter pylori infection

Project description:Based on preliminary data demonstrating that macrophages are critical regulators of Helicobacter pylori colonization and gastric pathology in mice, we sought to investigate how macrophages may serve as bacterial reservoirs of intracellular H. pylori.

2017-02-10 | GSE67270 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data