Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Bordetella

ABSTRACT: WGS of Bordetella species

PROVIDER: PRJDB7578 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	DRR165176_1.fastq.gz	Fastqsanger.gz
	DRR165176_2.fastq.gz	Fastqsanger.gz
	DRR165177_1.fastq.gz	Fastqsanger.gz
	DRR165177_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 245

Similar Datasets

Bordetella species

Project description:WGS of Bordetella species-Genome sequencing and assembly

| PRJNA383528 | ENA

Bordetella pertussis

Project description:WGS sequencing of Bordetella pertussis

| PRJNA262480 | ENA

Bordetella pertussis

Project description:WGS sequencing of Bordetella pertussis

| PRJNA263311 | ENA

Transcriptional profiling of Bordetella hinzii clinical isolates

Project description:Transcriptome analysis of Bordetella hinzii isolates from chronic infection in a human host with interleukin-12 receptor deficiency

2021-09-03 | GSE181542 | GEO

Bordetella

Project description:Whole genome sequencing of various Bordetella species

| PRJNA287884 | ENA

Comparative genomic hybridization of 12 Bordetella holmesii strains compared to Bordetella pertussis

Project description:Comparative genome hybridization (CGH) of a sample of 12 Bordetella holmesii strains compared to Bordetella pertussis Tohama I

2006-06-30 | E-TABM-55 | biostudies-arrayexpress

Molecular signatures of infection-induced immunity against Bordetella pertussis.

Project description:Murine lung gene expression responses to primary and secondary infection with Bordetella pertussis. Data were compared to other parameters such as flow cytometry and multiplex immunoassays.

2016-10-08 | GSE75438 | GEO

Microarray of Bordetella-infected bone marrow-derived dendritic cells

Project description:Bone marrow-derived dendritic cells were infected with live or heat-killed Bordetella and cells were analyzed on day 4 post-infection cells were >90% CD11c-positive

2017-01-19 | GSE76731 | GEO

Bordetella pertussis CGH

Project description:CGH analysis of 100 Bordetella pertussis strains

2010-10-01 | E-TABM-809 | biostudies-arrayexpress

Comparative phosphoproteomics of classical bordetellae elucidates the role of serine, threonine and tyrosine phosphorylation in Bordetella biology and virulence

Project description:This study characterised the Ser/Thr/Tyr phosphoproteome of classical Bordetella species and examined its role in Bordetella biology and virulence. This study found 70 unique phosphorylated proteins in the classical bordetellae group with a high degree of conservation observed and phosphorylation was a key regulator of Bordetella metabolism with proteins involved in gluconeogenesis, TCA cycle, amino acid and nucleotide synthesis significantly enriched. We also identified the phosphorylation of three key virulence pathways which separates classical from non-classical bordetellae including the type III secretion system, alcaligin synthesis (the primary siderophore produced by Bordetella) and the BvgAS master transcriptional regulatory system for virulence genes in Bordetella. Seven new phosphosites were identified in BvgA with 6 located in the DNA binding domain. Of the 7 new phosphosites, four were not detected in non-classical bordetellae. This suggests that serine/threonine phosphorylation may play an important role in stabilising or destabilising BvgA binding to DNA for fine-tuning of virulence gene expression and that BvgA phosphorylation may be an important factor that separates classical from non-classical bordetellae. This study provides the first insight into the phosphoproteome of classical Bordetella species and the role Ser/Thr/Tyr phosphorylation plays in Bordetella biology and virulence.

2021-03-26 | PXD020866 | Pride

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data