Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Nicotiana benthamiana

ABSTRACT: Small RNAs in RDR6 gene knockouted Nicotiana benthamiana (agroinfiltrated)

PROVIDER: PRJDB7883 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	DRR165214_1.fastq.gz	Fastqsanger.gz
	DRR165214_2.fastq.gz	Fastqsanger.gz
	DRR165215_1.fastq.gz	Fastqsanger.gz
	DRR165215_2.fastq.gz	Fastqsanger.gz
	DRR165216_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 10

Similar Datasets

Small RNAs from Nicotiana benthamiana leaves

2014-02-10 | GSE48886 | GEO

RNA sequencing of NlCSP11-infiltrated Nicotiana benthamiana

Project description:In order to find the differentially expressed RNAs and signaling pathways related to the dwarf phenotype induced by NlCSP11, 35S-NlCSP11, 35S-XopQ and 35S-GFP control were infiltrated into Nicotiana benthamiana. We analyzed the differentially expressed RNAs in the infiltrated leaves (NlCSP11_Z/XopQ_Z) and the upper uninfiltrated leaves (NlCSP11_U/XopQ_U) of N. benthamiana. KEGG annotation revealed a large number of differentially expressed RNAs involved in plant-pathogen interactions, indicating that NlCSP11 resulted in a more strong systemic resistance in N. benthamiana.

2024-05-30 | GSE267686 | GEO

Nicotiana benthamiana

Project description:Nicotiana benthamiana

| PRJNA256274 | ENA

Small RNAs from Nicotiana benthamiana leaves

Project description:Small RNA expression from Nicotiana benthamiana leaves was profiled with the primary goal of ascertaining microRNA isoform diversity for known, conserved families. A secondary goal was to provide a baseline small RNA expression atlas for this species and tissue. Two biological replicates of leaves from growth-room grown plants. The two libraries were each run twice on different runs, so there are a total of four datasets. For most analyses, it will be appropriate to combine the run1 and run2 versions for the libraries.

2014-02-10 | E-GEOD-48886 | biostudies-arrayexpress

Effect of Transcriptional-like Effectors (TALE) on Nicotiana benthamiana leaves

Project description:To investigate gene expression upon inoculation of Nicotiana benthamiana leaves with a TALE inducing cell death

2024-08-08 | GSE221441 | GEO

Effect of Transcriptional-like Effector (TALE) on Nicotiana benthamiana leaves

Project description:To investigate gene expression upon inoculation of Nicotiana benthamiana leaves with a TALE inducing cell death

2024-08-08 | GSE221293 | GEO

Small-RNA sequencing of WUS-induced GFP RNA degradation in Nicotiana benthamiana leaves

Project description:The 35S::GFP fluorescence was silenced 6-day after infiltration to Nicotiana benthamiana leaves due to the post-transcriptional gene silencing, but became stable by adding the viral suppressor 2b which repressed RNA silencing in plants. We performed the small RNA high throughput sequencing to test whether WUS can inhibit 2b functions in repressing plant RNA silencing.

2021-02-22 | GSE128863 | GEO

Nicotiana benthamiana

Project description:Nicotiana benthamiana Transcriptome or Gene expression

| PRJNA186756 | ENA

Nicotiana benthamiana

Project description:Nicotiana benthamiana Transcriptome or Gene expression

| PRJNA778604 | ENA

Nicotiana benthamiana

Project description:Nicotiana benthamiana Transcriptome or Gene expression

| PRJNA186900 | ENA