Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA Seq of hematopoietic stem and progenitor cells

ABSTRACT: RNA Seq of hematopoietic stem and progenitor cells

PROVIDER: PRJEB13002 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR1308090_1.fastq.gz	Fastqsanger.gz
	ERR1308090_2.fastq.gz	Fastqsanger.gz
	ERR1308082_1.fastq.gz	Fastqsanger.gz
	ERR1308082_2.fastq.gz	Fastqsanger.gz
	ERR1308083_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 18

Similar Datasets

RNA Seq of hematopoietic stem and progenitor cells

Project description:Rare dormant hematopoietic stem cells (dHSCs) reside at the top of the blood hierarchy harboring the highest long-term reconstitution capacity. Here, we present the global transcriptome of ex vivo isolated mouse multipotent dormant hematopoietic stem cells (dHSC), active HSCs (aHSCs) and multipotent progenitor cells (MPP1) as revealed by next-generation sequencing (RNA-seq) at the population level.

2017-05-18 | E-MTAB-4549 | biostudies-arrayexpress

Proteome in human hematopoietic stem and progenitor cell subpopulations from polycythemia vera patients and controls

Project description:Polycythemia vera (PV) is a myeloproliferative neoplasm (MPN) characterized by hyper-proliferation of the erythroid, megakaryocytic and granulocytic lineages and the presence of an activating mutation in JAK2. To elucidate mechanisms that regulate PV stem cells, we applied a newly developed data-independent acquisition (DIA) mass spectrometry (MS) technology to purified hematopoietic stem and progenitor cell (HSPC) subpopulations of patients with chronic and progressed PV. Proteomic analyses were supplemented by RNA-sequencing (RNA-seq) and identified targets validated by flow cytometry and functional in vitro assays.

2022-01-19 | PXD021178 | Pride

Competition between hematopoietic stem and progenitor cells controls the hematopoietic stem cell homeostasis [bulk RNA-seq]

Project description:Competition between hematopoietic stem and progenitor cells controls the hematopoietic stem cell homeostasis [bulk RNA-seq]

| PRJNA718091 | ENA

Ageing-associated proteome and acetylome of hematopoietic progenitor cells

Project description:Ageing-associated proteome and acetylome of hematopoietic progenitor cells

2020-09-24 | PXD021651 |

RNA-seq analysis of helios deficient hematopoietic stem and progenitor cells.

Project description:RNA-seq analysis of helios deficient hematopoietic stem and progenitor cells.

| PRJNA627717 | ENA

Single-cell RNA Seq of hematopoietic stem and progenitor cells

Project description:This dataset is part of a study that investigated how the hematopoietic system coordinates the rapid and efficient regeneration of the megakaryocytic lineage during stress scenarios. We found that the phenotypic hematopoietic stem cell (HSC) compartment contains stem-like megakaryocyte-committed progenitors (SL-MkPs), a cell population that shares many features with multipotent HSCs and serves as a lineage-restricted emergency pool for inflammatory insults. This dataset contains single-cell RNA sequencing data of 30 hematopoietic stem and progenitor cells which, in the context of our study, confirmed that MK-specfic transcripts are of highly variable expression in HSCs. The dataset further showed that variations in MK transcript expression in HSCs is not correlated with global transcriptomic rearrangements. Murine bone marrow cells were sorted by Lin-cKit+CD150+CD48- (referred to as cd150+ in the following) and Lin-cKit+CD150- (referred to as cd150- in the following). Transcriptomes of 11 cd150- and 9 cd150+ HSCs were determined using QUARTZ, a single-cell RNASeq protocol

2015-08-31 | E-GEOD-64002 | biostudies-arrayexpress

Analysis of RNA expression changes in normal human hematopoietic stem and progenitor cells

Project description:RNA expression analysis on purified human long-term and short-term hematopoietic stem cells (LT-HSC, ST-HSC), common myeloid and megakaryocyte-erythrocyte progenitor cells (CMP, MEP) using microarrays. FACS-purified hematopoietic stem and progenitor cell (HSPC) subsets were analyzed for changes in RNA expression using NimbleGen gene expression microarrays. Analysis of RNA expression of bone marrow-derived HSPC subsets of healthy human donors.

2014-02-07 | E-GEOD-52150 | biostudies-arrayexpress

Hematopoietic progenitor cells

Project description:Hematopoietic progenitor cells

| PRJNA593949 | ENA

Analysis of RNA expression changes in normal human hematopoietic stem and progenitor cells

2014-02-07 | GSE52150 | GEO

m6A-seq mapping of mouse hematopoietic stem/progenitor cells

Project description:m6A-seq mapping of mouse hematopoietic stem/progenitor cells

| PRJNA422167 | ENA