Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Bacillus cereus biovar anthracis diversity in Tai National Park, Côte d'Ivoire

ABSTRACT: Raw reads of 170 isolates of Bacillus cereus biovar anthracis (Bcbva) from Tai National Park, Côte d'Ivoire and eight Bcbva isolates from neighboring Grebo, Liberia

PROVIDER: PRJEB14616 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR1474720_1.fastq.gz	Fastqsanger.gz
	ERR1474720_2.fastq.gz	Fastqsanger.gz
	ERR1474730_1.fastq.gz	Fastqsanger.gz
	ERR1474730_2.fastq.gz	Fastqsanger.gz
	ERR1474740_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 356

Similar Datasets

Detection of Colorectal Adenomas in Côte-d’Or

Project description:Previous studies have shown geographic disparities in the detection of colorectal adenomas in Côte-d’Or, with an impact of the distance from the general practitioner and an ecological deprivation index (EDI). On the other hand, the extremely low detection rates for these lesions in everyday practice before the implementation of organized screening for colorectal cancer in the Côte-d’Or were shown. One of the aims of this screening is to reduce socio-geographic inequalities in access to care and prevention. Yet, participation in screening also varies depending on the socio-economic level. In this context, the Côte-d’Or Polyps Registry, the only body to have data for the pre-screening period (before 2003), will make it possible to determine whether the implementation of organized screening led to the elimination of socio-geographic disparities concerning the detection of adenomas.

| 2221851 | ecrin-mdr-crc

Medical Tai Chi Exercise Healing in Treating mCRC Patients

Project description:As a traditional martial art in China, Tai Chi Chuan has excellent health benefits along with its combat function.Studies have shown that Tai Chi as an exercise prescription can significantly reduce the incidence of cancer, but the complexity of Tai Chi Chuan routines, poor disease targeting, and the lack of traditional internal mental and physical training method limit the healing of tumours and other diseases. For this reason, we have established the Medical Tai Chi Exercise Healing System（MTCEH）, which integrates Tai Chi exercise, traditional Chinese internal mental and physical training method, rehabilitation medicine and sports medicine methods, on the basis of evidence-based medicine and with the aim of targeting different tumour treatments. With the characteristics of easily learning, internal and external training, and individualised treatment of tumours, this series of routines effectively combines traditional oriental Tai Chi martial arts with tumour treatment, which opens up a beautiful and mysterious oriental healing journey for integrative medicine.

| 114987 | ecrin-mdr-crc

Nelumbo nucifera cultivar:Chinese Tai-zi

Project description:Pseudo-chromosomes of Nelumbo nucifera cultivar 'Chinese Tai-zi'

| PRJNA396666 | ENA

Achromobacter xylosoxidans phages from Abidjan, Côte d’Ivoire

Project description:Characterization of Achromobacter xylosoxidans phages from Abidjan, Côte d’Ivoire

| PRJEB33638 | ENA

Acinetobacter baumannii phages from Côte d’Ivoire

Project description:Complete genome sequence of Acinetobacter baumannii phages from Abidjan, Côte d’Ivoire

| PRJEB28456 | ENA

The Taiman transcriptional coactivator engages Toll signals to promote apoptosis and intertissue invasion in Drosophila

Project description:The Drosophila Taiman (Tai) protein is homologous to the human steroid-receptor coactivators SRC1-3 and activates transcription in complex with the 20-hydroxyecdysone (20E) receptor (EcR). Tai has roles in intestinal homeostasis, germline maintenance, cell motility and proliferation through interactions with EcR and the coactivator Yorkie (Yki). Tai also promotes invasion of tumor cells in adjacent organs, but this pro-invasive mechanism is undefined. Here we show that Tai expression transforms sessile pupal wing cells into an invasive mass that penetrates the adjacent thorax during a period of high 20E. Candidate analysis confirms a reliance on elements of the 20E and Hippo pathways, such as Yki and the Yki-Tai target dilp8. Screening the Tai-induced wing transcriptome detects enrichment for innate immune factors, including the Spätzle (Spz) family of secreted Toll ligands that induce apoptosis during cell competition. Tai-expressing wing cells induce immune signaling and apoptosis among adjacent thoracic cells, and genetic reduction of spz, Toll or the rpr/hid/grim pro-apoptotic factors each suppresses invasion, suggesting an intercellular Spz-Toll circuit supports killing-mediated invasion. Modeling these interactions in larval epithelia confirms that Tai kills neighboring cells via a mechanism involving Toll, Spz factors, and the Spz-inhibitor Necrotic. Tai-expressing cells evade death signals by repressing the immune deficiency (IMD) pathway, which operates in parallel to Toll to control NFkB activity, and independently regulates JNK activity. In sum, these findings suggest that Tai promotes competitive cell killing via Spz-Toll, and that this killing mechanism supports pathologic intertissue invasion in Drosophila.

2020-06-15 | GSE133307 | GEO

Complete genome sequence of seven Escherichia coli bacteriophages isolated in Abidjan, Côte d’Ivoire

Project description:Escherichia coli bacteriophages isolated in Côte d’Ivoire

| PRJEB60596 | ENA

Fermented Mao-tai lees and gut microbiota

Project description:Fermented Mao-tai lees dietary supplementation influences gut microbiota structure and activity in pigs

| PRJEB27667 | ENA

Cytomegaloviruses in a Community of Wild Nonhuman Primates in Tai National Park, Cote D'Ivoire.

Project description:Cytomegaloviruses (CMVs) are known to infect many mammals, including a number of nonhuman primates (NHPs). However, most data available arose from studies led on captive individuals and little is known about CMV diversity in wild NHPs. Here, we analyzed a community of wild nonhuman primates (seven species) in Taï National Park (TNP), Côte d'Ivoire, with two PCR systems targeting betaherpesviruses. CMV DNA was detected in 17/87 primates (4/7 species). Six novel CMVs were identified in sooty mangabeys, Campbell's monkeys and Diana monkeys, respectively. In 3/17 positive individuals (from three NHP species), different CMVs were co-detected. A major part of the glycoprotein B coding sequences of the novel viruses was amplified and sequenced, and phylogenetic analyses were performed that included three previously discovered CMVs of western red colobus from TNP and published CMVs from other NHP species and geographic locations. We find that, despite this locally intensified sampling, NHP CMVs from TNP are completely host-specific, pinpointing the absence or rarity of cross-species transmission. We also show that on longer timescales the evolution of CMVs is characterized by frequent co-divergence with their hosts, although other processes, including lineage duplication and host switching, also have to be invoked to fully explain their evolutionary relationships.

| S-EPMC5795424 | biostudies-literature

First report of Sugarcane Streak Mosaic Virus (SCSMV) in Côte d'Ivoire

Project description:First occurrence of Sugarcane Streak Mosaic Virus (SCSMV) infecting Sugarcane in Côte d’Ivoire, West Africa

| PRJEB32734 | ENA