Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

BBSRC_Amplicon

ABSTRACT: Amplicon study from BBSRC-DBT project

PROVIDER: PRJEB15343 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR1612260_1.fastq.gz	Fastqsanger.gz
	ERR1612260_2.fastq.gz	Fastqsanger.gz
	ERR1614450_1.fastq.gz	Fastqsanger.gz
	ERR1614450_2.fastq.gz	Fastqsanger.gz
	ERR1614460_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 1200

Similar Datasets

Controlling enteric pathogens of poultry gut

Project description:Pilot Study DBT-BBSRC

| PRJEB22231 | ENA

Controlling enteric pathogens of poultry gut

Project description:BBSRC Main Experiment Shotgun Study

| PRJEB23356 | ENA

BBSRC

Project description:BBSRC

| PRJEB14829 | ENA

BBSRC Fish (three species)

Project description:BBSRC Fish (three species)

| PRJEB52898 | ENA

Amplicon sequencing of a K562 cell line model with a patient-based t(3;8) translocation following CRISPR treatment

Project description:Genome editing was conducted on a t(3;8) K562 model to investigate the effects of deleting different modules or CTCF binding sites within the MYC super-enhancer. To check mutations after targeting with CRISPR-Cas9 we performed amplicon sequencing using the Illumina PCR-based custom amplicon sequencing method using the TruSeq Custom Amplicon index kit (Illumina). The first PCR was performed using Q5 polymerase (NEB), the second nested PCR with KAPA HiFi HotStart Ready mix (Roche). Samples were sequenced paired-end (2x 250bp) on a MiSeq (Illumina).

2021-07-26 | E-MTAB-9937 | biostudies-arrayexpress

Proteomics of tissue matrix scaffold derived from decellularized mice mammary tissues, LC-MS/MS

Project description:This project is intended to identify the compositions of the tissue matrix scaffold (TMS) generated from the extracellular matrix (ECM) of decellularized NON-SCID mice breast tissues (DBT). Since ECM is the physicochemical support for the cells living in the tissue microenvironment, it is important to know the protein contents within the ECM that are critical for extra- and intracellular signaling, cell growth, migration, cell-cell/ECM interactions. The LC-MS/MS data will serve as a foundation for the downstream applications of the TMS system, and be compared with those of the Matrigel mass spectrometry.

2018-10-26 | PXD005697 | Pride

Genome-wide analysis of Alternaria stress-responsive transcriptome in tomato

Project description:Gene expression cascade in a plant is altered in times of stress. Reprogramming of the expression profiles of genes is required for a robust and specific response. Until now, tomato transcriptomic alteration in response to Alternaria fungal stress were not known. This study presents the profile of genes that are differentially expressed during Alternaria stress in local tomato cultivar (Pusa Ruby). At least 2944 genes expression was varied and pathways that are altered during this compatible interaction have been identified. Supported by DBT, Govt. of India.

2016-05-20 | GSE75923 | GEO

Brassica napus

Project description:Brassica napus BBSRC-SSR genetic map

| PRJNA174357 | ENA

Homo sapiens

Project description:DERBY BBSRC RET Study: Impact of resistance exercise on human skeletal muscle gene expression

| PRJNA208236 | ENA

marine metagenome

Project description:Megaviridae PolB amplicon project

| PRJDB8062 | ENA