Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Genome assemblies of Chlamydophila abortus

ABSTRACT: Genome assemblies of Chlamydophila abortus

PROVIDER: PRJEB17758 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Chlamydia abortus strain:B577

Project description:Chlamydophila abortus B577 genome sequencing

| PRJNA289099 | ENA

Chlamydia abortus LLG

Project description:Chlamydophila abortus LLG genome sequencing project

| PRJNA65241 | ENA

Chlamydia abortus strain:EAE-LX

Project description:Chlamydophila abortus EAE-LX genome sequencing

| PRJNA289095 | ENA

GcrA binding pattern to Brucella abortus genome

Project description:ChIP-seq analysis of GcrA atypical transcription factor in Brucella abortus

2019-09-03 | GSE136733 | GEO

Transcription profiling of B. abortus BvrS BvrR from B. abortus 2308

Project description:The analysis of the expression profile of the two component system BvrR/BvrS of the B. abortus 2308 making the comparison of the expression of the B. abortus 2308 and B. abortus 2308 BvrR- (mutant in the gen BvrR) whit the microarray of brucella melitensis (Brucearray)

2010-04-22 | E-MEXP-2564 | biostudies-arrayexpress

Brucella abortus ChipSeq analysis of BvrR

Project description:Brucella abortus ChipSeq analysis of BvrR

2020-11-10 | E-MTAB-9740 | biostudies-arrayexpress

Brassica napus Genome Assemblies

Project description:Brassica napus Genome Assemblies

| PRJEB79568 | ENA

RNA-seq based transcriptinal profiling of intracellular Brucella abortus and Brucella abortus-infected murine macrophages

Project description:We describe the isolation of sufficient Brucella abortus RNA from primary host cell environment using modified reported methods for RNA-seq analysis, and simultaneously characterize the transcriptional profiles of intracellular B. abortus and bone marrow-derived macrophages (BMM) from BALB/c mice at 24 h (replicative phase) post-infection.

2017-07-08 | GSE100914 | GEO

Gene expression profiling of Brucella abortus-infected mouse macrophages

Project description:Gene expression analysis of wild-type and STING knock-out mouse bone marrow-derived macrophages (mBMDM) infected with Brucella abortus or transfected with Brucella abortus DNA. Genes whose expression are affected by Brucella abortus in a STING-dependent manner will be identified and signaling pathways regulated by STING will be elucidated.

2017-11-06 | GSE96071 | GEO

Genome analysis of gene expression by THP-1 macrophage during Brucella abortus wild type and mutant strains infection

Project description:Brucella abortus (B. abortus), an intracellular bacterium, is the causative agent of Brucellosis. This organism invades into macrophages and then survives through its abilities to modulate host cells functions. The biggest problem caused by B. abortus is that it prevents macrophage elimination and makes it difficult to remove B. abortus from the host body. Therefore, it is essential to identify the bacterial genes involved in virulence factor as a first step to understanding the bacterial pathogenicity and controlling Brucellosis. To identify these genes, B. abortus mutant strains were generated using transposon mutagenesis and transcriptomic profile during macrophage infection were analyzed. The gene expression level was analyzed using total RNA obtained from THP-1 cells infected with B. abortus wild type and mutant strains and cellular immunity during the infections were compared to wild type infected cell to identify the role of genes in B. abortus pathogenicity. Transcriptomic profiling showed that two mutant strains having disrupted genes related to 4-hydrobenzoate 3-monooxygenase (PHBH) of C1 strain and heme exporter protein cytochrome C (CcmC) of C10 strain, induced suppression of cytokine expression during infection in human macrophages. Conversely, two other mutant strains of exopolyphosphatase (PPX)of C27 and Peptidase M24 of C32 induced activation of cytokine expression in the THP-1 macrophage cells.

2017-08-05 | GSE102260 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data