Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Microbial communities in Andean South America Altiplane

ABSTRACT: Microbialite and microbial mats systems in lagoons, salt flats and Volcanoes of Andean South America Altiplane

PROVIDER: PRJEB19379 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR1878606_1.fastq.gz	Fastqsanger.gz
	ERR1878606_2.fastq.gz	Fastqsanger.gz
	ERR1878617_1.fastq.gz	Fastqsanger.gz
	ERR1878617_2.fastq.gz	Fastqsanger.gz
	ERR1924357_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 7

Similar Datasets

Stratification of deep sediments from high altitude Andean lagoons

Project description:Stratification of deep sediments from high altitude Andean lagoons Genome sequencing and assembly

| PRJNA1067596 | ENA

Sustainability of wild plant use in the Andean Community of South America.

Project description:Overexploitation is the second biggest driver of global plant extinction. Meanwhile, useful plant species are vital to livelihoods across the world, with global conservation efforts increasingly applying the concept of 'conservation-through-use.' However, successfully balancing conservation and biodiversity use remains challenging. We reviewed literature on the sustainability of wild-collected plant use across the countries of Colombia, Ecuador, Peru, and Bolivia-a region of global importance for its biological and cultural richness. After applying defined search terms and a two-stage screening process, 68 articles were reviewed. The numbers which reported sustainable, unsustainable, or context-dependent outcomes were relatively even, but national differences emerged. Through narrative synthesis, we identified five key, reoccurring themes: plant biology; land tenure; knowledge, resource, and capacity; economics and market pressures; and institutional structures, policy, and legislation. Our results show the need for flexible, context-specific approaches and the importance of collaboration, with bottom-up management and conservation methods involving local communities and traditional ecological knowledge often proving most effective.

| S-EPMC8285437 | biostudies-literature

A Metagenomics Analysis of Pandemic 2009 H1N1 Infection in Patients in North America

Project description:The Virochip microarray (version 4.0) was used to detect viruses in patients from North America with unexplained influenza-like illness at the onset of the 2009 H1N1 pandemic.

2010-11-01 | GSE24034 | GEO

Lycalopex culpaeus strain:Andean fox

Project description:Lycalopex culpaeus strain:Andean fox Genome sequencing

| PRJNA232708 | ENA

The peopling of South America and the trans-Andean gene flow of the first settlers.

Project description:Genetic and archaeological data indicate that the initial Paleoindian settlers of South America followed two entry routes separated by the Andes and the Amazon rainforest. The interactions between these paths and their impact on the peopling of South America remain unclear. Analysis of genetic variation in the Peruvian Andes and regions located south of the Amazon River might provide clues on this issue. We analyzed mitochondrial DNA variation at different Andean locations and >360,000 autosomal SNPs from 28 Native American ethnic groups to evaluate different trans-Andean demographic scenarios. Our data reveal that the Peruvian Altiplano was an important enclave for early Paleoindian expansions and point to a genetic continuity in the Andes until recent times, which was only marginally affected by gene flow from the Amazonian lowlands. Genomic variation shows a good fit with the archaeological evidence, indicating that the genetic interactions between the descendants of the settlers that followed the Pacific and Atlantic routes were extremely limited.

| S-EPMC5991523 | biostudies-literature

Mediators of Atherosclerosis in South Asians Living in America (MASALA) Study

Project description:Mediators of Atherosclerosis in South Asians Living in America (MASALA) Study

| PRJNA814794 | ENA

Mediators of Atherosclerosis in South Asians Living in America (MASALA) Study

Project description:Mediators of Atherosclerosis in South Asians Living in America (MASALA) Study

| PRJNA814796 | ENA

Gut microbiota of Andean bears

Project description:Fecal microbiota of wild and captive Andean bears

| PRJEB21054 | ENA

Mediators of Atherosclerosis in South Asians Living in America (MASALA) Study: Genomics

Project description:Mediators of Atherosclerosis in South Asians Living in America (MASALA) Study: Genomics

| PRJNA805343 | ENA

A Metagenomics Analysis of Pandemic 2009 H1N1 Infection in Patients in North America

Project description:The Virochip microarray (version 4.0) was used to detect viruses in patients from North America with unexplained influenza-like illness at the onset of the 2009 H1N1 pandemic. We used metagenomics-based technologies (the Virochip microarray) and deep sequencing to analyze nasal swab samples from individuals with 2009 H1N1 infection. This Series includes the Virochip microarray data only.

2010-11-01 | E-GEOD-24034 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data