Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Cappable seq of Photorhabdus luminescens TTO1

ABSTRACT: Cappable seq of Photorhabdus luminescens TTO1

PROVIDER: PRJEB23380 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR2192824.fastq.gz	Fastqsanger.gz
	ERR2192825.fastq.gz	Fastqsanger.gz
	ERR2192826.fastq.gz	Fastqsanger.gz
	ERR2192827.fastq.gz	Fastqsanger.gz
	ERR2192828.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

DNA adenine methyltransferase (Dam) overexpression impairs Photorhabdus luminescens motility and virulence

Project description:Dam, the most described bacterial DNA-methyltransferase, is widespread in gamma-proteobacteria. Dam DNA methylation can play a role in various genes expression and is involved in pathogenicity of several bacterial species. In the entomopathogenic bacterium Photorhabdus luminescens, a dam ortholog was identified. Overexpression of dam in P. luminescens did not impair growth ability in vitro. In contrast, compared to a control strain harboring an empty plasmid, a significant decrease in motility was observed in the dam-overexpressing strain. In addition, the dam-overexpressing P. luminescens strain showed a delayed virulence compared to that of the control strain after injection in larvae of the lepidopteran Spodoptera littoralis. These results reveal that Dam plays a major role during P. luminescens insect infection.

2017-10-04 | GSE100650 | GEO

Transcriptionnal analysis of a Photorhabdus luminescens TT01 variant, named VAR*, which is a colonial and phenotypic variant displaying delayed pathogenicity in the insect, Spodoptera littoralis.

Project description:Photorhabdus luminescens lives in a mutualistic association with entomopathogenic nematodes and is pathogenic for insects. Variants of Photorhabdus frequently arise. VAR* is a colonial and phenotypic variant displaying delayed pathogenicity in the insect, Spodoptera littoralis. In this study, we evaluated the role of transcriptomic modulation in determining the phenotypic variation and delayed pathogenicity of VAR* with respect to the corresponding wild-type form, TT01alpha. A P. luminescens microarray was used to determine changes in transcript profiles in the exponential and stationary phase growth phase of VAR* and TT01alpha grown in LB broth.

2010-10-13 | GSE24627 | GEO

Photorhabdus luminescens subsp. luminescens ATCC 29999

Project description:Photorhabdus luminescens subsp. luminescens ATCC 29999 Genome sequencing

| PRJNA210920 | ENA

Photorhabdus luminescens strain:LN2

Project description:Photorhabdus luminescens Genome sequencing

| PRJNA259697 | ENA

Photorhabdus luminescens subsp. luminescens strain:DSM 3368

Project description:Photorhabdus luminescens subsp. luminescens:DSM 3368 Genome sequencing

| PRJNA273502 | ENA

Photorhabdus luminescens strain:HIM3

Project description:Photorhabdus luminescens strain:HIM3 Genome sequencing and assembly

| PRJNA378433 | ENA

Photorhabdus luminescens strain:PB45.5

Project description:Photorhabdus luminescens strain:PB45.5 Genome sequencing and assembly

| PRJNA296855 | ENA

Photorhabdus luminescens NBAII H75HRPL105

Project description:Photorhabdus luminescens NBAII H75HRPL105 Genome sequencing and assembly

| PRJNA229907 | ENA

Photorhabdus luminescens NBAII HiPL101

Project description:Photorhabdus luminescens NBAII HiPL101 Genome sequencing and assembly

| PRJNA229914 | ENA

Photorhabdus luminescens strain:ATCC 29999

Project description:Photorhabdus luminescens strain:ATCC 29999 Genome sequencing

| PRJNA257857 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data