Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Alm Cdiff FMT 16S data

ABSTRACT: 16S data from FMT trial for the treatment of recurrent Clostridium difficile infection

PROVIDER: PRJEB23489 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR2198010.fastq.gz	Fastqsanger.gz
	ERR2198020.fastq.gz	Fastqsanger.gz
	ERR2198030.fastq.gz	Fastqsanger.gz
	ERR2198040.fastq.gz	Fastqsanger.gz
	ERR2198050.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 83

Similar Datasets

Alm Cdiff FMT WGS data

Project description:WGS data from FMT trial for the treatment of recurrent Clostridium difficile infection

| PRJEB23524 | ENA

Treatment of rCDI with FMT, WGS data

Project description:Treatment of recurrent Clostridioides difficile infection with Fecal Microbiota Transplantation

| PRJEB39023 | ENA

FMT datasets

Project description:FMT datasets of patients with recurrent Clostridioides difficile infection (rCDI), inflammatory bowel disease (IBD), and colonization from multi-drug resistant bacteria (MDRB)

| PRJEB47909 | ENA

FMT for CDI

Project description:Faecal microbiota transplant as treatment for recurrent Clostridioides difficile infection

| PRJEB30298 | ENA

FMT 16S seq

Project description:FMT 16S seq Raw sequence reads

| PRJNA975684 | ENA

Human fecal bile acid profiles before and after fecal transplant (Part 2)

Project description:Understand the bile acid profiles from the feces of fecal microbiota transplant FMT patients that successfully recover from recurrent C. difficile infection. Submitting fecal samples from patients prior to their FMT and post FMT. Interested in the bile acid profiles of the donor stool that is used in successful transplants. Bile acids are important for C. difficile spore germination and outgrowth.

2015-04-28 | ST000303 | MetabolomicsWorkbench

Bile acid analysis of the germ free mouse gut

Project description:We are interested in understanding the bile acid profiles from the feces of fecal microbiota transplant FMT patients that successfully recover from recurrent C. difficile infection. We have are submitting fecal samples from patients prior to their FMT and post FMT. We are also interested in the bile acid profiles of the donor stool that is used in successful transplants. Bile acids are important for C. difficile spore germination and outgrowth.

2017-08-02 | ST000831 | MetabolomicsWorkbench

Modulation of mucosal immune responses to Clostridium difficile by peroxisome proliferator-activated receptor γ and microRNA-146b

Project description:BACKGROUND: miRNA have been shown to play an important role during immune-mediated diseases such as inflammatory bowel disease. The aim of this study was to assess differential expression of miRNA between uninfected and infected mice with Clostridium difficile strain VPI 10463 RESULTS: MicroRNA (miRNA)-sequencing analysis indicated that miR-146b, miR-1940, and miR-1298 were significantly overexpressed in colons of C. difficile-infected mice Colon of uninfected and C.difficile-infected C57BL6/J WT mice were sampled at day 4 post-infection with Clostridium difficile VPI 10463. The infection dose was 107 cfu/mouse.

2012-07-11 | E-GEOD-39235 | biostudies-arrayexpress

Observational analysis of relationship between postoperative diarrhea, including high ostomy output and Clostridium difficile infection, and postoperative complication in colectomy patients with colorectal cancer

Project description:Primary outcome(s): The incidence of postoperative diarrhea, high ostomy output and Clostridium difficile infection, and relationship of diarrhea and postoperative complication in colectomy patients with colorectal cancer

| 2637468 | ecrin-mdr-crc

AOS10-FMT could rescure the adverse effects induced by high fat diet & STZ on the Colon [16S-colon]

Project description:We reported the side-effects of High fat diet & STZ on the colon, and found that the AOS10-FMT could rescure the side-effect of High fat diet & STZ in many factors

2022-10-01 | GSE179093 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data