Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Genome sequence of Epibacterium ulvae U95

ABSTRACT: Genome sequence of Epibacterium ulvae U95 based on new sequencing data and an improved assembly

PROVIDER: PRJEB23557 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Epibacterium ulvae strain:u95

Project description:Epibacterium ulvae U95 genome sequencing

| PRJNA303608 | ENA

Epibacterium ulvae strain:U95

Project description:Epibacterium ulvae strain:U95 Genome sequencing and assembly

| PRJNA419424 | ENA

Epibacterium ulvae

Project description:Epibacterium ulvae overview

| PRJNA419434 | ENA

Project description:Epibacterium ulvae U95

| PRJEB16117 | ENA

Genome sequence of Epibacterium ulvae strain DSM 24752<sup>T</sup>, an indigoidine-producing, macroalga-associated member of the marine Roseobacter group.

Project description:Strain U95T (= DSM 24752T = LMG 26464T) is the type strain of Epibacterium ulvae, which is the type species of the genus Epibacterium. This genus belongs to the marine Roseobacter group. E. ulvae Strain U95T was isolated from the macroalga Ulva australis, is Gram-negative, rod-shaped and motile. Here we describe the permanent draft genome sequence and annotation of E. ulvae U95T with a focus on secondary metabolite production and interaction with its host. The genome contains 4,092,893 bp, 3977 protein-coding genes and 60 RNA genes. The genome encodes a gene cluster for synthesis of the blue-pigmented secondary metabolite indigoidine and contains several genes for adhesion mechanisms, putative bacteriocin, siderophores, a type VI secretion system, and enzymes that confer oxidative stress resistance. Combined, these features may aid in the successful colonization and persistence of E. ulvae on host surfaces and in competition with the surrounding microbial consortium.

| S-EPMC7989816 | biostudies-literature

Pseudoalteromonas ulvae

Project description:Pseudoalteromonas ulvae overview

| PRJNA375829 | ENA

Fulvivirga ulvae

Project description:Fulvivirga ulvae Genome sequencing

| PRJNA789061 | ENA

Pseudoalteromonas ulvae UL12

Project description:Pseudoalteromonas ulvae UL12 Genome sequencing and assembly

| PRJNA196227 | ENA

Proteogenomics of Epibacterium

Project description:Proteogenomic analysis of Epibacterium mobile BBCC367, a relevant marine bacterium isolated from the South Pacific