Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Salmonella Enteritidis in laying flocks, 2016-2017

ABSTRACT: Salmonella Enteritidis in laying flocks, 2016-2017

PROVIDER: PRJEB24665 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR2278720_1.fastq.gz	Fastqsanger.gz
	ERR2278720_2.fastq.gz	Fastqsanger.gz
	ERR2278730_1.fastq.gz	Fastqsanger.gz
	ERR2278730_2.fastq.gz	Fastqsanger.gz
	ERR2278740_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 78

Similar Datasets

Quantitative proteomics of Hcp-mediated Salmonella Enteritidis in ducks (Anas platyrhynchos)

Project description:Salmonella Entertidis (SE) causes persistent infections and egg contamination in laying ducks.Hcp roles as the core structural and effector proteins of T6SS. We generated an hcp deletion mutant MY1△hcp and detected its ability to invade duck granulosa cells (dGCs) and contaminate eggs. Then, Quantitative proteomics of Hcp-mediated Salmonella Enteritidis was performed.

2023-03-11 | PXD032735 | Pride

Xinglinwan reservoir 2016-2017 eukaryote

Project description:Xinglinwan reservoir 2016-2017 eukaryote Raw sequence reads

| PRJNA510458 | ENA

Xinglinwan reservoir 2016-2017 bacteria

Project description:Xinglinwan reservoir 2016-2017 bacteria Raw sequence reads

| PRJNA510463 | ENA

Transcriptome of DTAC-resistant Salmonella Enteritidis

2012-12-31 | GSE41606 | GEO

The 2016-2017 Yemen cholera outbreak strain

Project description:The 2016-2017 Yemen cholera outbreak strain

| PRJEB24611 | ENA

Transcriptomic Profiling of Salmonella enterica Enteritidis and Typhimurium under Chlorine Based Oxidation

Project description:Investigation of whole genome gene expression level changes in Salmonella enterica serova Enteritidis and Typhimurium under chlorine treatment

2010-03-10 | GSE20701 | GEO

Global gene expression analysis of the response of Salmonella Enteritidis to egg-white exposure

Project description:Transcriptional profiling of Salmonella Enteritidis to egg-white exposure at 45°C for 7 min, 25 min and 45 min

2017-06-09 | GSE92545 | GEO

Transcriptome of DTAC-resistant Salmonella Enteritidis

Project description:Screen for differences in gene expression between a parental Salmonella enterica serovar Enteritidis strain (ATCC4931) and an adapted strain with increased resistance to the widely used antimicrobial sanitizer dodecyltrimethylammonium chloride (DTAC) Time course of comparative gene expression changes between log phase parental and adapted Enteritidis strains after 0, 10, 30 and 150 min of exposure to 50% of the respective MIC of DTAC.

2012-12-31 | E-GEOD-41606 | biostudies-arrayexpress

MicroRNA expression in chicken cecum following Salmonella Enteritidis infection

Project description:White leghorn layers were infected with Salmonella Enteritidis. The cecum were collected at 7 days post infection for total RNA isolation. The significantly expressed microRNAs between infected and non-infected chickens were identified through Solexa sequencing technology.

2017-03-08 | GSE59748 | GEO

Comparative analysis of Salmonella Typhi, Paratyphi A, Enteritidis and Typhimurium core proteomes

Project description:Salmonella enterica subsp. enterica contains more than 2,600 serovars of which four are of major medical relevance for humans. While the typhoidal serovars (Typhi and Paratyphi A) are human-restricted and cause enteric fever, non-typhoidal Salmonella serovars (Typhimurium and Enteritidis) have a broad host range and predominantly cause gastroenteritis. In this study, we compared the core proteomes of Salmonella Typhi, Paratyphi A, Typhimurium and Enteritidis using contemporary proteomics. Five isolates, covering different geographical origins, and one reference strain per serovar were grown in vitro to the exponential phase. Protein levels of orthologous proteins between serovars were compared and subjected to gene ontology term enrichment and inferred regulatory interactions. Differential expression of the core proteomes of the typhoidal serovars appears mainly related to cell surface components and, for the non-typhoidal serovars, to pathogenicity. Our findings may guide future development of novel diagnostics and vaccines, and understanding of disease progression.

2019-05-13 | PXD011154 | Pride

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data