Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

BEH

ABSTRACT: Transcriptome from a planktonic Radiolaria-Dinophyta system

PROVIDER: PRJEB25030 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR2305665_1.fastq.gz	Fastqsanger.gz
	ERR2305665_2.fastq.gz	Fastqsanger.gz
	ERR2305666_1.fastq.gz	Fastqsanger.gz
	ERR2305666_2.fastq.gz	Fastqsanger.gz
	ERR2305667_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 8

Similar Datasets

BHA

Project description:Transcriptome from a planktonic Radiolaria-Dinophyta system

| PRJEB25203 | ENA

BGZ

Project description:Transcriptome from a planktonic Radiolaria-Dinophyta system

| PRJEB25029 | ENA

BGY

Project description:Transcriptome from a planktonic Radiolaria-Dinophyta system

| PRJEB25032 | ENA

Project description:Radiolaria isolates

| PRJNA658429 | ENA

Haemophilus parasuis F9 transcriptome in biofilm and planktonic cultures using RNA sequencing

Project description:Purpose: Study transcriptome differences between biofilm, planktonic and stationary cultures. Methods: Total mRNA from in vitro cultures was extracted and sequenced using Ion Torrent PGM sequencer. Results: Characteristic transcriptomic profile was observed for biofilm, planktonic and stationary cultures. Biofilm and planktonic were similar biological states. Conclusions: Results suggest that H. parasuis F9 has more active metabolism during biofilm or planktonic growth when compared to stationary culture. Some identified membrane-related genes could play an important role in biofilm life.

2014-04-02 | GSE56428 | GEO

Vibrio cholerae biofilm and planktonic growth RNAseq analysis

Project description:To determine transcriptome differences in Vibrio cholerae when grown as planktonic and biofilm cultures, whole-genome level transcriptional profiling was performed using RNAseq analysis. Transcriptomes of biofim and planktonic cultures were compared in this study.

2020-05-28 | GSE135887 | GEO

Transcriptome of 6h static biofilm Actinobacillus pleuropneumoniae

Project description:The transcriptome of Actinobacillus pleuropneumoniae biofilms was compared to the transcriptome of planktonic bacteria

2013-05-20 | GSE43821 | GEO

Transcriptome of 4h static biofilm Actinobacillus pleuropneumoniae

Project description:The transcriptome of Actinobacillus pleuropneumoniae biofilms was compared to the transcriptome of planktonic bacteria

2013-05-20 | GSE43820 | GEO

Pellicle Stimulon in Mycobacterium tuberculosis

Project description:Triplicate 10mL cultures of M. tuberculosis grown in Sautons media without detergent in planktonic (exponential growth phase at OD600 0.2) compared to pellicle (3 weeks growth without shaking in 5% CO2) conditions. comparison of pellicle growth transcriptome to planktonic growth transcriptome, 3 biological replicates, third is dye-flip

2013-05-24 | E-GEOD-37392 | biostudies-arrayexpress

RNA-Seq of Planktonic P. aeruginosa in flow

Project description:To determine whether flow alters the gene expression of planktonic P. aeruginosa, we designed a long microfluidic channel that enabled us to expose bacteria to flow for significant lengths of time and then be fixed as they exit the channel. The experiments mimic the kinds of shear flows characteristic of a wide variety of confined flow configurations. Using this microfluidic system, we performed bulk RNA-Seq analysis of planktonic bacteria that flowed for 55 min at a shear rate of 20 per second, and compared gene expression of this population with a control population of planktonic bacteria under similar conditions with no flow.

2024-07-03 | GSE271426 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data