Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

TB WGS

ABSTRACT: TB WGS validation

PROVIDER: PRJEB25543 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR2503360_1.fastq.gz	Fastqsanger.gz
	ERR2503360_2.fastq.gz	Fastqsanger.gz
	ERR2503370_1.fastq.gz	Fastqsanger.gz
	ERR2503370_2.fastq.gz	Fastqsanger.gz
	ERR2503380_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 418

Similar Datasets

Bovine-TB WGS Validation

Project description:Bovine-TB WGS Validation

| PRJEB40440 | ENA

TB WGS Tanzania

Project description:TB WGS Tanzania

| PRJEB29435 | ENA

TB disease classification

Project description:Validation of gene expression levels to assess classification of TB patients and healthy controls

2015-12-21 | GSE74092 | GEO

TB disease classification

Project description:Validation of gene expression levels to assess classification of TB patients and healthy controls qPCR gene expression profiling. Whole blood gene expression from TB patients (positive in GenXpert assay) and healthy controls; both tuberculin skin test positive (TSTpos) and -negative (TSTneg).

2015-12-21 | E-GEOD-74092 | biostudies-arrayexpress

Pakistan TB WGS

Project description:WGS of M. tuberculosis from Pakistan

| PRJEB98915 | ENA

Bacterial WGS validation panel

Project description:Bacterial WGS validation panel

| PRJNA341407 | ENA

Blood Transcriptional Profiles of TB in South Africa

Project description:The aim of this study was to compare the transcriptional response to TB in regions of different incidence / prevalence. Experimental Design: Whole blood collected in tempus tubes from patients with different spectra of TB disease. All patients were sampled prior to the initiation of any antimycobacterial therapy. Active Pulmonary TB: PTB - All patients confirmed by isolation of Mycobacterium Tuberculosis on culture of sputum. Latent TB: LTB - All patients were screened at a tuberculosis clinic. All were positive by Interferon-Gamma Release assay(IGRA); specifically Quantiferon Gold In-Tube Assay (Cellestis, Australia). Latent patients had no clinical, or microbiological evidence of active infection and were asymptomatic. Experimental Variables: Patient group: Active PTB; Latent TB. There are no healthy controls in this dataset as it was being used for validation only. Controls: Latent TB individuals are used as a control for PTB in this dataset since there are few to no unexposed adult controls in Cape Town.

2010-08-11 | E-GEOD-19442 | biostudies-arrayexpress

Pakistan TB WGS GTgKSQ35+iUQginrtZNuDw==

Project description:WGS of M. tuberculosis from Pakistan

| PRJEB105363 | ENA

Project description:WTCCC project Tuberculosis (TB) samples

| EGAD00000000016 | EGA

Project description:TB

| PRJEB7522 | ENA